| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4201 |
|---|
| Symbol | |
|---|
| ID | 9158389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 4329528 |
|---|
| End bp | 4330622 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF475 |
|---|
| Protein accession | YP_003649108 |
|---|
| Protein GI | 296141865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCACTGC GGACCTTCGG ACTCTCGATC GTCGTGACGA TCGCCGCCCT GATCGTCGCC
TTCCTCTACG GCGGCCCCCA GGCCCTACTG CTCACCGCGA TCCTGGGCGT CCTGGAGATC
AGCCTGTCGT TCGACAACGC GGTGATCAAC GCGACGGTGC TGCGCCGGAT GAGCGACTTC
TGGCAGAAGA TGTTCCTCAC CGTGGGCATC CTGATCGCCG TGGTGGGCAT GCGGCTGTTG
TTTCCGCTGG CCATCGTGTG GATCACCGCG GGTCTCGACC CGGTGCACGC CATGCGACTC
GCGCTCAACC CGCCCACCGA CGGCTCCCCC ACGTACGAAT CTCTCGTGAC CGCGGCGCAC
CCCCAGATCG CGGCCTTCGG CGGCATCTTC CTGCTGATGC TCTTCCTCGA CTTCGTACTC
GCGGAGAAGG ACGTCACCTG GCTCAGCTGG ATCGAGAAGC CCCTGGAGAA GATCGGCCGG
CTCGACCAGC TGTCCGTGGT GATCGCCTCC GGCGCGCTGC TCTACACCGC GATGTACATC
GCTCACCCCG GCGAGGAGAC CACGGTGCTC GTCGCCGGTC TGCTGGGAAT GATGACGTAC
CTGGTGGTGA ACGGCCTCGG CGAGCTCTTC CACATCGACG AGGAAGCGGA GATCGCCGAC
CTCGACGCCG AGAGCAAGCC GAACAGCGGA CCATCGGAGC TGGCGAAGGC GGCCGGTAAG
GCGGGCTTCT TCCTGTTCCT CTACCTCGAG GTGCTCGACG CGTCGTTCTC CTTCGATGGG
GTGATCGGCG CGTTCGCGAT CACCGCTGAT CCGATCATCA TCGCCCTGGG CCTCGGCTTG
ATCGGCGCGA TGTTCGTCCG GTCCATCACC GTGTACCTGG TGCGCCAGGG CACGCTGTCG
CAGTACGTGT ACCTCGAACA CGGGGCGCAC TGGGCGATCG GTGCGCTCGC CGTGATCCTG
TTGTACTCGA TCGGCACCCC GGTACCCGAG GTGGTGACCG GCCTGATCGG ACTCGTGCTG
ATCATCGCGG CGCTGATCTC CAGCGTGGTC CGCAACCGGC GTGAGGGCGC CACGCCGGTT
CCTGTGGATG CCTAA
|
|---|
| Protein sequence | MALRTFGLSI VVTIAALIVA FLYGGPQALL LTAILGVLEI SLSFDNAVIN ATVLRRMSDF
WQKMFLTVGI LIAVVGMRLL FPLAIVWITA GLDPVHAMRL ALNPPTDGSP TYESLVTAAH
PQIAAFGGIF LLMLFLDFVL AEKDVTWLSW IEKPLEKIGR LDQLSVVIAS GALLYTAMYI
AHPGEETTVL VAGLLGMMTY LVVNGLGELF HIDEEAEIAD LDAESKPNSG PSELAKAAGK
AGFFLFLYLE VLDASFSFDG VIGAFAITAD PIIIALGLGL IGAMFVRSIT VYLVRQGTLS
QYVYLEHGAH WAIGALAVIL LYSIGTPVPE VVTGLIGLVL IIAALISSVV RNRREGATPV
PVDA
|
|---|
| |