| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4173 |
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| Symbol | |
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| ID | 9158361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4295827 |
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| End bp | 4296849 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003649081 |
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| Protein GI | 296141838 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCT TCCGGACCTC CCTGATCAGC TTCCTGGTGT TCGCCGTGGT GGTGGCGGTG
GGGACCACCT TCACGGTGCG GGCGTTGCAG CGGCCCGCGC CGGGCACGCA GGTCGGGTAC
ACCGCACAAT TCACCAACGC CTCCGGACTG CGCACCGGCG ACGACGTGCG CGTCCTCGGC
GTGCAGGTGG GCAAGGTCAC CTCGGTGTCG CTCCAGCGCG GCGAGGGCGG CCGCGGTTCG
TTCGCCGACG TGGCCTTCTC GCTGGACCGG GACCAGCGGA TCTTCCGGAA TTCGAAGCTG
GCCATCCGTT TCCAGAATCT CACGGGCCAG CGGTACATCG ATCTGCAGCG CGCCGCCGCA
CCCGGCGACG AGGTGGCCGA GAACGCGAGC ATCACCACCG AGCAGACGGT GCCGTCCTTC
GACATCACCA CGGTCTTCAA CGGCCTCCAG CCCGTCCTCG CCACCATGCG CCCGGAGGAC
ATCGATCATT TCGCGCAGTC GGTCGCGGTG GTGATGAACG GTGACGGGTC CGGCCTGGGG
CCGATGCTCG ACTCCATCGA CAAACTCGCC ACCTTCACCG ATAACCGCGC GGCGCTGTTC
GAGACGCTGA TCCGGAACTT CTCCGACTTA TCGGAGTCGA TCGGCGGCAA GTCCGGTTCG
GTCACCACAC TCGTCGGCCT GCTCCAGCGG CTCGCCGGCA TCATGGCCAA ATCCGCTCCG
GCCTACCGAG TCCTGTCCGA TCAGGGGGCA CAGGTGATGA CGGCGGCGGG CTCCCTCCTC
GCCGGCCTCG GGATGACACC GAACACCAAT CCGTGGCTCG ACGACCTGCT CTCGCCCGAG
GCGAAGAAGC TCGGCCCGCT GGTCGACCTC GCCGCGATGC TTCCCGGACT CTTCGCCCTT
CTCACCGGCC AGGGATTGCC GAAGGCCAAG GGCGACAGTC GCTGCAGCAA GGGCGTCGCC
TCGCTGCCCG CCGACGTCCA GATGTTCATC CGGGGGACGA GGGTCGTGCT GTGCAATCCG
TGA
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| Protein sequence | MSRFRTSLIS FLVFAVVVAV GTTFTVRALQ RPAPGTQVGY TAQFTNASGL RTGDDVRVLG
VQVGKVTSVS LQRGEGGRGS FADVAFSLDR DQRIFRNSKL AIRFQNLTGQ RYIDLQRAAA
PGDEVAENAS ITTEQTVPSF DITTVFNGLQ PVLATMRPED IDHFAQSVAV VMNGDGSGLG
PMLDSIDKLA TFTDNRAALF ETLIRNFSDL SESIGGKSGS VTTLVGLLQR LAGIMAKSAP
AYRVLSDQGA QVMTAAGSLL AGLGMTPNTN PWLDDLLSPE AKKLGPLVDL AAMLPGLFAL
LTGQGLPKAK GDSRCSKGVA SLPADVQMFI RGTRVVLCNP
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