| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4172 |
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| Symbol | |
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| ID | 9158360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4294814 |
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| End bp | 4295830 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003649080 |
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| Protein GI | 296141837 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.795057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATCGA TCTCCTCCGT ACCCGGCATG ACCGTCGAAC CCAAGCAACT GGTTCGACGG
GGAGCCCTCA CCGTCGCGAT CGTCGTCGTG GTCGCACTAC TCGCGTGGGG CATCACCGCC
CTCGCGCGAC CCGCCCCGAT GCGGATCACC CTGCTCACCT CGGAGGTGGC CCCGGGAGTG
AACAACGGCA CGGTGATCGA GATGAACGGG ATCCGGATCG GGACCGTTTC GGGCATCACG
CAGGAGGGAT CGGGACGCCT CGGCATCGAC ATGGATCTCG ACAAGGACAA GGCGGCGGGA
CTCACCGACG CGCTGCTCGC GGACTTCGCC CCCAACAACC TGTTCGGCAT CACCTCCGTG
CAGATCATTC CGTCGCCCGC GGGCTCGCCG CTGCAGGACG GCGCGCGGGT GCGCCCGGCC
ACCGCACCCA GTGATTCGAC GATGTCCGGC CTACTGCGCA CCCTCGCCGA TGTGGAATCG
ACGGCCCTGC GGCCCTACAT GTCCGATCTG CTGCGTCAGT CCGACACCGC GACGAAGGGC
TTCCTGCCCA TGGTGCGCGC GCTCGGTGCG GTCGCCCAGG CCAATGCCGA GACGCAGACC
GTGCCCACCT CGTACACGCT CCCGATCCTG TCCAGCGCCC TGCAGGGCAT CGGCGCCTCG
ACCGACGACC TCCTCGCGGC GATCAAACTC CTCTGGGACT GGCCCGGACC CGATACACCC
GGCTACCCGA AGGCCCAGAC CGCGACGGTC GACACGCTGG TCAACGTGAC ATCACCCGAT
ATCGCCAATC TCGTCAAATC CCTGCAGCCG CTGGCTCCGA CGCTCTCGGT GCTGGCCGAT
GCGGAGCGGC GGGGCGTCGC CTCGATGCCC GGTGCCGCCC GGAACGGACA GCAGATCTCC
GATCTCATCG AGGCGATCCG CCGCGCCATC AAGGACACCC CGAACGGCAA GGTTCTCAAT
CTCGATGTGC AGGCGCGGCC CGTCCCGATC CCGCCGCAGG GCGGTGGTGG ACGATGA
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| Protein sequence | MASISSVPGM TVEPKQLVRR GALTVAIVVV VALLAWGITA LARPAPMRIT LLTSEVAPGV
NNGTVIEMNG IRIGTVSGIT QEGSGRLGID MDLDKDKAAG LTDALLADFA PNNLFGITSV
QIIPSPAGSP LQDGARVRPA TAPSDSTMSG LLRTLADVES TALRPYMSDL LRQSDTATKG
FLPMVRALGA VAQANAETQT VPTSYTLPIL SSALQGIGAS TDDLLAAIKL LWDWPGPDTP
GYPKAQTATV DTLVNVTSPD IANLVKSLQP LAPTLSVLAD AERRGVASMP GAARNGQQIS
DLIEAIRRAI KDTPNGKVLN LDVQARPVPI PPQGGGGR
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