Gene Tpau_4152 details

Gene Information

• Locus tag: Tpau_4152
• ID: 9158340
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 4281820
• End bp: 4282464
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 71%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_003649060
• Protein GI: 296141817

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACCTCC GCAGATTTCT CGACGGTCGC GGGGAGCAGC TCGCTTTTCT CACCTACCAG 
CACGCCTCGC TGGTGATCCA GTGCGTCCTG GCCGCGGTGG TGATCGCGCT GGTTCTGGCC 
GCCGCGGTGT ACCGGTCCCG CGCCGGGGCC GCGATCGCCA CGGCGATCGC CTCGGTGGGA 
ATGACGATCC CCTCGCTCGC CCTGCTCGCA CTGCTGCTGC TCGTCTTCGG CCTCGGGGTG 
GCCCCGTCGG TGACGATGCT CGGCTTCTAC GCCACCCTCC CGATCCTCAC CAGCGCCATC 
GTCGGGTTGC GTGCGGTGCC GCCGAACATC GTGGAGGCGG CCCGGGGCAT CGGCATGCCG 
CGCTGGCGGG TGCTCGCCAC CGTCGAACTG CCGCACGCCT GGCCCGTGAT CCTCACCGGT 
ATCCGGGTGA GCACCCAGCT CGTGGTGGGC GTCGCCACCG TGGTGGCGTA CGTGTTGGGG 
CCCGGCCTGG GCTCGCTCAT CTTCTCCGGC CTCGCCCGCC TCGGCGGCGC CGGCGCCCTC 
GAATCCGCCC TCACCGGCAC GGTTCTCGTG GTGATCGTCG CGCTCGTGCT CGACGGCCTG 
CTGGTGCTGT TGGGCCGGTT CACCGTCTCG AAGGGGCTGG TATGA 

 

Protein sequence

MDLRRFLDGR GEQLAFLTYQ HASLVIQCVL AAVVIALVLA AAVYRSRAGA AIATAIASVG 
MTIPSLALLA LLLLVFGLGV APSVTMLGFY ATLPILTSAI VGLRAVPPNI VEAARGIGMP 
RWRVLATVEL PHAWPVILTG IRVSTQLVVG VATVVAYVLG PGLGSLIFSG LARLGGAGAL 
ESALTGTVLV VIVALVLDGL LVLLGRFTVS KGLV