Gene Tpau_4130 details

Gene Information

• Locus tag: Tpau_4130
• ID: 9158318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 4255285
• End bp: 4255986
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 68%
• Product: ABC transporter related protein
• Protein accession: YP_003649038
• Protein GI: 296141795

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.85696
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGTTC TCGACGACGT CTGGCACGCC TACGACGAGC GCACCGTGTT GCGCGGTGTC 
TCGGCGGAGC TGACAGAACG CCGGGTCGGG ATCATCGGTG CGAACGGTTC GGGGAAATCG 
ACCTTGGCGC GCACCGTGAA CGGGCTCGTC GTCCCGGACC GCGGATCCGT CCACACGCTC 
GGCCTGGACG TGCGCAAGCA CCGGGCCGAA GTCCGCGCGC AGGTCGGGTT CATGTTCGCC 
GATGCGTCGG CGCAGATCGT GATGCCCACG CCCGCAGAGG ACGTCGCGTT GTCGCTGCGG 
CCGCGGGGCC GGCGCCGCGG TCGGCTCGAT GCTGCGCAGA CGGCGCGGAT CCGGGAGCGG 
GTGGTGCAGG TTCTCACCGA GTTCGGTCTC GCCGACCACG CGGACGCACC GGCGCAGCTG 
CTCAGTTCGG GGCAGAAGCA GATGTTGGCC TTCGCGTCGG TGTTGGTGAC CGAGCCCAAG 
ATCCTGGTGT GCGACGAGCC GACCACGCTG TTGGATCTGC GGAATGTGCT CACGGTGCGA 
ACCCGGATCG CCGCGCTGGA ACAGCAGGTG ATCCTGTTGA CGCATCACCT GGAATTGCTC 
GACGATTTCG ATCGGGTGCT GGTGATGGAC GAGGGCGCGG TGGTCTTCGA CGGTGCCCCT 
GCCGCAGCGA TTTCCGCATA CCGGGAGCTG GCGGAACAGT GA 

 

Protein sequence

MIVLDDVWHA YDERTVLRGV SAELTERRVG IIGANGSGKS TLARTVNGLV VPDRGSVHTL 
GLDVRKHRAE VRAQVGFMFA DASAQIVMPT PAEDVALSLR PRGRRRGRLD AAQTARIRER 
VVQVLTEFGL ADHADAPAQL LSSGQKQMLA FASVLVTEPK ILVCDEPTTL LDLRNVLTVR 
TRIAALEQQV ILLTHHLELL DDFDRVLVMD EGAVVFDGAP AAAISAYREL AEQ