Gene Tpau_4118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4118 
Symbol 
ID9158306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp4242697 
End bp4243302 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003649026 
Protein GI296141783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTGA CCGATCTGCC CGCGACCGAT ACCGATCTGA CCGCCAAGGC CCGGATCCGC 
AACGCCGCGC TCGAACTGTT CGCCGCCCAC GGCGAGAGCG GCGTCTCGCT CCGTGCGGTC 
GCCGCACATG CCGGGGTCGC GGTCGGACTG GTGCAGCACC ACTTCAAGAC CAAAGAGGGC 
CTGCGCGCCG CCGTCGAGCA ACAGATCGTC GAGTACCACG CCCAGGCGAT CGCCGGCGTC 
CCCGACGACG GCCCGCCTCC CGAGGTGGCC TCGGCGCGGG ACGCCGCGGT CCGACAGATG 
CTGGCGCGAC ACCCCGCGGT CGTGGATTAT CTGCGCCGAT CGTTCCTGGA CCCGGGCGGA 
TCGGATCTCC TGATCCGGCT CACCGAGCTG GGCCGAAGCG AGGTGGTGCG GCTGCGGGCC 
GCGCAGCTCG CCTCCACCGA GCGTGCGGAA TCCGACCAGG TGATCGGCCT GATGGTGCGA 
CAGATGGGCA CCCTGTTCCT GCAACCCCTC ATCGACGCGA TGTGGGAGCA CCTGCGCGGG 
CCGGACGCAC CGTCGGACGA GAAGCCGCAG CTGTCCGTGA CCACCGCGCC GGGCCGCGCA 
CGCTGA
 
Protein sequence
MPVTDLPATD TDLTAKARIR NAALELFAAH GESGVSLRAV AAHAGVAVGL VQHHFKTKEG 
LRAAVEQQIV EYHAQAIAGV PDDGPPPEVA SARDAAVRQM LARHPAVVDY LRRSFLDPGG 
SDLLIRLTEL GRSEVVRLRA AQLASTERAE SDQVIGLMVR QMGTLFLQPL IDAMWEHLRG 
PDAPSDEKPQ LSVTTAPGRA R