Gene Tpau_4116 details

Gene Information

• Locus tag: Tpau_4116
• ID: 9158304
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 4240631
• End bp: 4241389
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 70%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003649024
• Protein GI: 296141781

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATCG CAGGTAGCAC AGCGCTGGTC ACCGGCGGCG CGTCGGGCCT CGGGCTCGCC 
ACCGTCACCG CCCTCGCCGG CGCGGGGGCC TCGGTGGTCG CCGTCGACCT GCCCTCGGCG 
AACACCGAGG CACTCGATGC GCTCGGTGCC GCCGTGCGCT TCGCCCCCGC CGATGTGACC 
GATGAGGACG CGATCACCGC CGCCGTCGAG CAAGCGAACG CCGAAGGCAC GCTGCGGATC 
GCGGTCAACT GCGCCGGTAT CGGCAATGCC ATCAAGACCG TCGGCAAGAA CGGCCCGTTC 
CCACTGGCCG ACTTCGAGCG GGTGGTGAAG GTGAACCTGA TCGGCACCTT CAACGTGACT 
CGCCTGGCGG CCTACGCCAT CTCGAAGAAC GAGCCGGTGG GCGAGGAACG CGGGGTCATC 
ATCAACACCG CCTCCGTGGC GGCCTTCGAC GGACAGATCG GGCAGGCGGC CTACTCCGCG 
TCCAAGGGCG GCGTCGTGGG CTCCACGCTG CCGATCGCGC GCGATCTCGC CTCGCTGCTG 
ATCCGGGTGA ACACCATCGC ACCCGGCCTA TTCAAGACCC CGCTGCTCGG CAGCCTCCCC 
GAGGAGGCTC AGCGTTCGCT CGGCGCCCAG GTGCCTCATC CCAGCCGGCT CGGCGACCCG 
TCGGAGTACG CGCAGCTGGT GGCGGCGATC ATCACCAACC CGATGCTCAA CGGCGAGACG 
ATCCGGCTCG ACGGCGCGAT TCGCATGGCG CCGCGCTGA 

 

Protein sequence

MEIAGSTALV TGGASGLGLA TVTALAGAGA SVVAVDLPSA NTEALDALGA AVRFAPADVT 
DEDAITAAVE QANAEGTLRI AVNCAGIGNA IKTVGKNGPF PLADFERVVK VNLIGTFNVT 
RLAAYAISKN EPVGEERGVI INTASVAAFD GQIGQAAYSA SKGGVVGSTL PIARDLASLL 
IRVNTIAPGL FKTPLLGSLP EEAQRSLGAQ VPHPSRLGDP SEYAQLVAAI ITNPMLNGET 
IRLDGAIRMA PR