Gene Tpau_4101 details

Gene Information

• Locus tag: Tpau_4101
• ID: 9158289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 4226015
• End bp: 4226809
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 67%
• Product: ABC transporter related protein
• Protein accession: YP_003649009
• Protein GI: 296141766

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGTTT CCATTCGGAC GCAGGACGCC TGTGTCGACT TCCCCGTGTT CGACGCCAAA 
TCGCGCTCGC TCAAGCGCGC GGTCATGGGA TCGGCGGGCG GCAAGGTGAT GGCCGACGAC 
AACGTGGTCG TGGTCGAGGC GCTGCGCAAC ATCACCATGA ACCTCGACGA GGGCGATCGC 
GTGGGCCTGG TGGGCCACAA CGGCGCCGGC AAGTCGACGC TGCTGCGCCT GCTGGCCGGG 
ATCTACGAGC CGACCCGCGG ATCGGCCGTG GTGAAGGGAC GCGTAGCGCC GGTCTTCGAC 
CTGGGCGTGG GCATGGACCC CGAGATCTCC GGTATGGAGA ACATCATCAT TCGCGGGCTG 
TTCCTGGGGC AGACCCGCAA GTCGATGCTG CGCAAGGCCG ACGAGATCGC CGAGTTCACC 
GAGTTGGGCG ACTACCTGTC GATGCCGCTG CGCACCTACT CCACCGGTAT GCGGGTGCGC 
ATCGCTCTGG GCGTGGTGAC CTCGATCGAC CCCGAGATCC TGCTGCTCGA TGAGGGCATC 
GGCGCCGTCG ACGCCGAGTT CATGCGTAAG GCCCGCAAGC GACTGGCCGC GCTGGTCGAG 
CGCTCCGGCA TCCTGGTCTT CGCCTCGCAC TCCAACGAGT TCCTGGCCCA GCTCTGCGAC 
CGGGCCATGT GGATCGACCA CGGCCAGGTA CGCCAGGAGG GCGGCATCGA GGAGGTCGTC 
ACCGCGTACG AAGGCGCCGA CGCCGGCGCC CAGGTGCGCA AGGTGCTCGA CATGCTGGAA 
GCCGAGGATG ACTGA 

 

Protein sequence

MSVSIRTQDA CVDFPVFDAK SRSLKRAVMG SAGGKVMADD NVVVVEALRN ITMNLDEGDR 
VGLVGHNGAG KSTLLRLLAG IYEPTRGSAV VKGRVAPVFD LGVGMDPEIS GMENIIIRGL 
FLGQTRKSML RKADEIAEFT ELGDYLSMPL RTYSTGMRVR IALGVVTSID PEILLLDEGI 
GAVDAEFMRK ARKRLAALVE RSGILVFASH SNEFLAQLCD RAMWIDHGQV RQEGGIEEVV 
TAYEGADAGA QVRKVLDMLE AEDD