Gene Tpau_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4060 
Symbol 
ID9158245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4192255 
End bp4192665 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003648969 
Protein GI296141726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.735994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGC AGCACGACAT CGCCAGCGCG GAGAGCCGGG CGCGGCGGGA GACCGGCCTC 
GAGGTACTCG CCGGAATCGA CGGCGAACAG GCACGGGCGG TGATCGATTC ACTCGCCGAG
ACCAATCCTG CTCTCGCACA CCACATCGCC GCGTGGGGAT TCGGCGACGT CTACGCCCGG
CCGGGCCTGG ACCCGCGCAG CCGACAGCTG GTGACGCTGG GAATCCTCAC CGCCCTGGGC
GGCACCGAGA ACCAACTGCG CGTGCACGTG AACACCTCAC TCAACGTGGG TATCACCCGC
GAGGAGATCA ACGAGGTGTT CCTGCACTCC GCTGCTTATG CGGGCTTCCC GCGCGCGATC
AACGCGACGC TCGTCGCGCG AGAGGTGTTC GCCGAGCGCG ACTCCGACTG A
 
Protein sequence
MTEQHDIASA ESRARRETGL EVLAGIDGEQ ARAVIDSLAE TNPALAHHIA AWGFGDVYAR 
PGLDPRSRQL VTLGILTALG GTENQLRVHV NTSLNVGITR EEINEVFLHS AAYAGFPRAI
NATLVAREVF AERDSD