| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4043 |
|---|
| Symbol | |
|---|
| ID | 9158227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 4173091 |
|---|
| End bp | 4174056 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003648953 |
|---|
| Protein GI | 296141710 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCACG TCGTCGCCCT GCCGGTCTGC GACGGTATGA CGCTGTTCGA GTACGGAATC
GCGGTCGAGG CCCTCGGGTT CGCCTGGGGG GATGTGACGC TCGACTACGA CGTCCGAGCC
TGTGGGCCGG CAGGAGGAGT GCACACGGTC GGAGGGGCAA TACTGACCCC GGGCTTCGGC
CTCGCCGACA TCGCGACTGC CGATACCGTC ATCGTGACTG CGGTGACCGA TCCGCGCCGG
AACTCCAATC CCGAGTGGAC CGAATACCTG CGCGCCGCCG CGGGCAACGG CGCGCGAATG
GTGTCGATCT GCAGCGGTGC TTTCGCTCTC GCCGAGGCGG GCCTACTCGA CGGACGTCGC
GCCACGACGC ATTGGCGCTA CGCGAGCCTT CTGCAGCATC GCTTCCCACG TGTTCACGTG
ACACCGTCGG ACCTCTACGT GCGTGATGGG AATGTGACGA CCGGGGCCGG GTCTGCTGCT
GGACTCGACT TGTGCTTCAA GCTGATTCGT GAAGATCACG GGCCGGCGAC CGCTAACGAG
GTCGCGCGAC GCATGGTGGT TGCACCGCAC CGGGACGGCG ATCAATCGCA GTTCGTGACG
ATCGATGCCC TCCGCCCGGA TGTGGATGCG CGGTTCGCCG ATTTCCTGGA GTCGATCGCC
CACTGTCTGG ACACCGTCGC GGGGGTCGAC GAAATGGCGA CTCGGGCTGG CGTCTCGCGT
CGTACCCTGC ATCGCCAGTT CAAACGGCAC ACGGGTTCGG CTCCGCTGGA GTGGCTCGTT
CGACAGCGGG TGTATCGCGC GATGGGTCTG CTCGAGACCA CCGACGAGCC GGTCACTGCA
GTCGCCGCGC GCGCCGGTTT CGATGCTGAG GAGACCCTTC GCTATCACTT TAAGCGGCAG
ACCGGGCTCA ATCCCACCGC GTACCGCGAC CGGTTCCGAT CCCAGCGGGA CGAGGCCATA
TTTTGA
|
|---|
| Protein sequence | MAHVVALPVC DGMTLFEYGI AVEALGFAWG DVTLDYDVRA CGPAGGVHTV GGAILTPGFG
LADIATADTV IVTAVTDPRR NSNPEWTEYL RAAAGNGARM VSICSGAFAL AEAGLLDGRR
ATTHWRYASL LQHRFPRVHV TPSDLYVRDG NVTTGAGSAA GLDLCFKLIR EDHGPATANE
VARRMVVAPH RDGDQSQFVT IDALRPDVDA RFADFLESIA HCLDTVAGVD EMATRAGVSR
RTLHRQFKRH TGSAPLEWLV RQRVYRAMGL LETTDEPVTA VAARAGFDAE ETLRYHFKRQ
TGLNPTAYRD RFRSQRDEAI F
|
|---|
| |