| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4029 |
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| Symbol | |
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| ID | 9158213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4157305 |
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| End bp | 4158204 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003648939 |
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| Protein GI | 296141696 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.185534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGGC AGCATGCCCT CGCCCCGGCG CTCACTGAGT TCCACGCCGT CATGCGCACC
GGCAGCTTCG CCGGCGCAGC GACCGAGCTG CGGCTCACCC CGACCACGGT GAGCCGGTCG
ATCCACCGCC TGGAGCACCG GCTGCGCCTG CGCCTGTTCG TTCCCCAAGG GCGCGGCGTG
GCCCCCACCG CTGCCGCGAC CGAGCTGGCC CGGTACGCCG AACGTGCGCT CGACGAGCTC
GCCGTCGGCC TCCAGCGCGC GGATCTCGAG GCCTCGCCCG CCCCACTGAT CCGGCTCGGA
TTCATCCGCA CGCTGGGAGC GTCCTTCGTT CCCCGGATCG TGGCCGCGTA CCGCCGTCCA
CACCCGGACG TGCGGTTCGT CTTCGAACAG GGCGTCACCG ACGATCTGCT CGACGCGGTC
TCGGGGCGGC GCATCGATGC GGCGCTCGTC TCACCGCCCC CGGCCCGCGA CGGACTCACG
GTGACCGCGC TGTTCGATCA GCCACTGGTG GTGGTCCCGC CCCCGGATTC GCCGTTCGCG
GGGCGGGGGG AGATCGCCCT CGCCGAGCTG GCCGACGAAG GATTCATTCT GGCCCAGGCC
GGCCTCGGCA CTCGGGCGGC CACCGATGCA CTGTTCCTCG GCGCCGGCTT CGAACCCCGC
ATCGTGCTGG AGACGGAGGA CATGGCGATG GCACGCGCCA TGGCTCAGGA GGGGTTGGGG
CTGGCACTGG TGCCCGGTCC GGCCCCGGGT GACCCACCGT TCCCGCAGGA ACACGTGCGT
TTGACCGACG CCGCTGCGGT CCGCTCAGTG GTCGTGGTGA CCGCGTCGGA CGCGGCCGAA
TCCTCCCCCG CGGTCGCCTT CGCCCGGTTC TTGGCCCCGG CCGCCGCACC CCGGGGATGA
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| Protein sequence | MDRQHALAPA LTEFHAVMRT GSFAGAATEL RLTPTTVSRS IHRLEHRLRL RLFVPQGRGV
APTAAATELA RYAERALDEL AVGLQRADLE ASPAPLIRLG FIRTLGASFV PRIVAAYRRP
HPDVRFVFEQ GVTDDLLDAV SGRRIDAALV SPPPARDGLT VTALFDQPLV VVPPPDSPFA
GRGEIALAEL ADEGFILAQA GLGTRAATDA LFLGAGFEPR IVLETEDMAM ARAMAQEGLG
LALVPGPAPG DPPFPQEHVR LTDAAAVRSV VVVTASDAAE SSPAVAFARF LAPAAAPRG
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