Gene Tpau_4020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4020 
Symbol 
ID9158202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4148842 
End bp4150122 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content68% 
IMG OID 
ProductProtein of unknown function DUF2029 
Protein accessionYP_003648930 
Protein GI296141687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.643753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAACG AGATCAGCCG GCGGTTCCCG CGCCAGTGGT GGGTGATGGC GCTGTTCGCC 
GTGGCCGCCG GGATCGCGGT GTGGCAGCAG TTCGTGCGAA TCCCGTTCTC CACGCCGATG
TTCGGCCTGT TCCACAACCA GATTGACGCC GAGGTCTACC GCAAGGGTGG CGAGATCGTG
GCGCACGGCG GGGCCGGCCT CTACGACGGT CCGCTGCTCA ACGACATCCT GCCCTTCACG
TACACGCCCT TCGCGGGCGT GATCTTCGTT CCGCTCTCGT GGATGTCGAC CGAGGTGCTG
CGCTGGGTGT GGACGATCGC GATCATGGTC GCGCTGCTGG CCTGCATCCT GATCGCCTTC
CGGCTGCTGG GCTTCGCCCG CGACCGCCGG GTCTGGTTCG CCGCGATCTG CCTCACCCTG
GTGGCCACGG TGCTCGAACC GGTGCGCACC ACGATCTGGT TCGGGCAGAT CAACGTCTTC
CTCATGCTGA TCCTGCTGTG GGACCTCGGA CGCCCGAAGG GGTCGCGCGG CAAGGGATTC
AGCATCGGCA TCGCCGCCGG CATCAAGCTC ACGCCGCTGT TCTTCCTCGC CTACCTCGTG
GTCACCCGGC AGTGGCGCGA GGCCCGCAAT GCGCTGATCA CCCTCGCCGG CACCGTGGCC
ATCGGCTTCG CGGTGATCCC GCAGGAATCG CTGAAGTACT GGTCGGGCAC GTTCCTCGAC
GCGAACCGCG TGGGCGAGCC CAACCAGGTG GGCAACCAGT CCATCAACGG CCTGATCGCC
TACCTCTCCC ATGCTGACGA ACCGTCGACC GCGCACTGGC TGCTCGCGGC CGTGCCCGCC
GCGCTCGCCG GTCTCGCCGT GGCCGCGTGG GCGTACCGGC GCGGTCACGT GCTGCTCGCG
ATCACCCTCG TCGGCCTCAC CGCGTGCGCC GTCTCGCCGT TCTCGTGGGG CCACCACTGG
GTGTGGTTCG TGCCGCTGCT CATCGTGCTG CTCACCCCGG CGTTGCTCGC GACAGACTGG
CCGCACCGCC TGGCCTACCT GGTGGCGCCG CTCGCGCTGG TGGCGGCCAC GTTCATCTGG
GTCACCTATT TCCCGAACCT GCAGCCCACC GGGGTCGAGA CCGTGCACGA CACCTATGCC
ATCGGTATCT TCTTGCGGCC CTTCGACAAT CCTGTGCTCA AGGCCCTCGC GGGCGGTGTC
TACGTCTGGC TGTTCCTGGC CACCCTGATC GGCAGTGCGG CGTATCTCGC CCGGGCGGAC
CGGTCGGGTC GTGACGCCTG A
 
Protein sequence
MANEISRRFP RQWWVMALFA VAAGIAVWQQ FVRIPFSTPM FGLFHNQIDA EVYRKGGEIV 
AHGGAGLYDG PLLNDILPFT YTPFAGVIFV PLSWMSTEVL RWVWTIAIMV ALLACILIAF
RLLGFARDRR VWFAAICLTL VATVLEPVRT TIWFGQINVF LMLILLWDLG RPKGSRGKGF
SIGIAAGIKL TPLFFLAYLV VTRQWREARN ALITLAGTVA IGFAVIPQES LKYWSGTFLD
ANRVGEPNQV GNQSINGLIA YLSHADEPST AHWLLAAVPA ALAGLAVAAW AYRRGHVLLA
ITLVGLTACA VSPFSWGHHW VWFVPLLIVL LTPALLATDW PHRLAYLVAP LALVAATFIW
VTYFPNLQPT GVETVHDTYA IGIFLRPFDN PVLKALAGGV YVWLFLATLI GSAAYLARAD
RSGRDA