Gene Tpau_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_4002 
Symbol 
ID9158184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4132463 
End bp4133701 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content70% 
IMG OID 
Productdomain of unknown function DUF1727 
Protein accessionYP_003648912 
Protein GI296141669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGGAC TCCCCCTCCG CGCCCGCACG GCGCTGTTCG CCGCCCGTTC CGCAGCCTGG 
GCGTCGCAGC GCGCCGGCCG CGGCAAGGGC TCGATGATCG GCGGGCTCGT GGCCCTGAAG
ATCGAGCCCA ACCTGATGAC CAGCCTCGCG GCGGGCAAGC GCACGGCCGT GATCACCGGC
ACGAACGGCA AGTCGACCAC CACCCGGATG ACGGCGACCG CGCTCGGGAC GCTCGGCGCC
GAGGTCGCGA CCCAGGCCGA CGGCGCGAAT ATGGACGCCG GCATCGTCGC CGCGCTGACC
GCCCACCTCA CGGCACCGCT CGCGGCCCTG GAGGTGGACG AGCTGCACGT ACCGCACGTC
CTCGACGCGG TGCAGGCCGA GACGCTCGTG CTGTTGAACC TCTCGCGCGA TCAGCTCGAC
CGGGTGGGTG AGATCAACGC CATCGAACGC AAGATCCGCG CCGCGGTCGA TGCGCACCCC
GCCTTGACCG TGGTCGCCAA CTGCGACGAC GTGCTGGTCG CCTCGGTGGC GTACGACGCG
AAAGAGGTCG TGTGGGTCGC CGCCGGCGCC GGCTGGACCT CGGACTCCGT CTCCTGTCCG
CGCTCGGGTG AGCCGATCGT GCGTGACGGC GAGCATTGGT ATTCGACGGG CACCGACTTC
TCGCGACCTG CCCCCGACTG GTGGGTCGAT GACGAGAACA TCTACGGCCC GGATGGTTTC
GTCGCTCCGC TCACACTGAA GTTGCCCGGT CGGGCGAACC GCGGCAATGC CGCGCAGGCC
GTCGCGGCCG CCGTCGCGAT GGGTGCCGAT CCCGCAGCCG CGGTCGCCGC GGTCGGTACG
GTGGGCGAGG TGGCCGGCCG CTACTCGACG GTGACCGTGG GCGAGCACAC CGTGCGGATG
CTGTTGGCCA AGAATCCGGC CGGATGGCAG GAGGCGATGT CGATGATCGA CGGCACCGCG
GAGGGACTGG TGATCGCGGT GAACGGTCAG GTCCCCGACG GCGAGGACCT TTCCTGGCTT
TGGGATGTGC AGTTCGAGCG GTTCGAGAAC GGCAAGGTGG TCGCCTCGGG CGAACGCGGT
GCCGATCTGG CGGTACGGCT CACCTACGCC GGGGCCGAGC ACTCGCTGGT GGCCGATCCG
GTGGCGGCGA TCGCATCGTG CCCACCCGGA CGAGTGGAGG TGCTGGCGAA CTACACCGCC
TTCCGTGATC TGAATACGGC ACTGGAGGGC CGCGCCTGA
 
Protein sequence
MPGLPLRART ALFAARSAAW ASQRAGRGKG SMIGGLVALK IEPNLMTSLA AGKRTAVITG 
TNGKSTTTRM TATALGTLGA EVATQADGAN MDAGIVAALT AHLTAPLAAL EVDELHVPHV
LDAVQAETLV LLNLSRDQLD RVGEINAIER KIRAAVDAHP ALTVVANCDD VLVASVAYDA
KEVVWVAAGA GWTSDSVSCP RSGEPIVRDG EHWYSTGTDF SRPAPDWWVD DENIYGPDGF
VAPLTLKLPG RANRGNAAQA VAAAVAMGAD PAAAVAAVGT VGEVAGRYST VTVGEHTVRM
LLAKNPAGWQ EAMSMIDGTA EGLVIAVNGQ VPDGEDLSWL WDVQFERFEN GKVVASGERG
ADLAVRLTYA GAEHSLVADP VAAIASCPPG RVEVLANYTA FRDLNTALEG RA