| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3999 |
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| Symbol | |
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| ID | 9158181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 4129722 |
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| End bp | 4130657 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003648909 |
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| Protein GI | 296141666 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTCC ACCGCCTGCG GATCCTGCGC GAACTCGCCG ATCGTGGCAC CGTCGCGGCC
ACCGCGCGAG CGCTGGATAT GACGCCGTCT GCGGTCTCGC AGCAGCTCAA GGTGCTGGCC
CGGGAGGCAG GCGTCGACTT GCTGGAACCC GACGGCCGGC GGGTACGCCT GACCGATGCG
GGGCTCGCTC TGGTGGTGCG GGCCGAATCC GTGCTCGGCG AACTCGAACG TGCTCGCGCC
GAGATGGACC GCTACCGCTC CACGCCCACC GGTGTCGTGC GCCTGACCCT GTTCCCGTCG
GCGGCCGAAC TGCTGCTCCC CGGCGTGCTG CGCCGCACCA CCGGGGCGGG CGTGCAGGTG
ACCGCCGCCG ACGCCGACCT CCCCGGCACC GAGTTGCCCG CGATGCTGGC GGACGCCGAT
GTCGTGGTGG CGCACCGCGA CGAGCGCGCC CCCGCGCTGG GCGGTCCCCG CATCGCCTCC
CGCGTTCTCA TGCGCGAGCC GATCGACCTC GTCGTGCCGA TGGACCATCC GCTCGCGGCG
GCTGGGCGCG TCGCCGCGGA ACAGCTCAAA GATCTCGACT GGATCAGTGT GCGCGACGGC
TTCCCGGTCG ACGACGTGTT GCGCTCCTTG GCGACGATCA CCGGTGTGCA GCCGCGGATC
GTGCAGCGGA TCAACGATTT CCACACCATT CAGGCGATGG TCGCGGCGGG TCTCGGAGTA
GCCCTTGTGG CCCGGCATGC GGTCACCCAT CCCGGCGTGC GCGGATTGGA GATCGCGGGC
GTTCTCGCCG CCCGCATCCT CGAGGTGGCG ACCCGGCCGG GTGCCGAGCG GCGACCCGCG
GTGGCCGCCG TGCTCCGTGC GCTCGATGAC GAGGTGGCAG CGGTCCATGC GGACGGTGCT
GGCATCAGGC AGATTCCAAC GCTCGACTGG ACCTGA
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| Protein sequence | MDVHRLRILR ELADRGTVAA TARALDMTPS AVSQQLKVLA REAGVDLLEP DGRRVRLTDA
GLALVVRAES VLGELERARA EMDRYRSTPT GVVRLTLFPS AAELLLPGVL RRTTGAGVQV
TAADADLPGT ELPAMLADAD VVVAHRDERA PALGGPRIAS RVLMREPIDL VVPMDHPLAA
AGRVAAEQLK DLDWISVRDG FPVDDVLRSL ATITGVQPRI VQRINDFHTI QAMVAAGLGV
ALVARHAVTH PGVRGLEIAG VLAARILEVA TRPGAERRPA VAAVLRALDD EVAAVHADGA
GIRQIPTLDW T
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