| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3997 |
|---|
| Symbol | |
|---|
| ID | 9158179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 4126996 |
|---|
| End bp | 4128375 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | monooxygenase |
|---|
| Protein accession | YP_003648907 |
|---|
| Protein GI | 296141664 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.784522 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGC CGTTGCTGCT CAGCGCGTTC GCCATGGCCT GCGTCGGGCA TCAGTCCGCT
GGCCTGTGGA CCCGCCCCGA AGACCGGAGC ACCCACTACA CCGAGCTCGA TCACTGGATC
TCACTTGCCC GGCTGCTCGA CGACGCCGGA TTTCACGCGC TCTTCCTCGC CGATGTCCTG
GGCACCTATG ACGTGTACGG GGGTACCCGC GACGAGGCGG TGCGCTCCGC TCTGCAAGTC
CCGGTGAACG ATCCGATCCT GGCGATCTCC GCCATGGCCG CCGCCACTCG GAACCTGGGC
TTCGGCGTCA CGGTCTCGAC CACGTACGAG CAGCCGTACG CCCTGGCGCG CCGAATGACT
ACGCTCGACC ACCTCACCCG GGGACGGATC GGGTGGAACG TGGTCACTGG CTATCTGGAC
TCCGCGGCGA AGAACCTGGG TTTCACGGCG CAGATCCCGC ACGATCAGCG CTACGACATC
GCCGACGAGT ACCTCGAGGT CTGCTACAAG CTGTGGGAGC ACTCGTGGAC CGACGCCGCC
GTGGTCGCCG ATCGCGCCAC CGGTGTCTAC GCCCGACCTG ATCAGGTGCG CGATATCGAT
CACCATGGAG AGTATTTCAC CGTTCCGGGC GCATTCCTGT GCGAGCCGTC GCCGCAGCGC
ACACCCGTGA TCTTCCAGGC CGGATCCTCG CCGCGAGGCA GACGGTTCGC AGGTCGGCAT
GCCGAGGCCG TCTTCGTGAT CGGCCCTACA CCCGCCGCGG TCCGGTCGAC GGTGGCCGCG
GTCCGCGCCG AGGCGGAGGC GGCGGGCCGC GACCCGCGGT CGGTGCGGAT CATCGCGGGC
CTCACCGCCG TCGTTCGTGC CACTGACGAG GAAGCGGAGG AAGCGCTCAG CGAATATCGA
CACTCCGCCA GTGAATCCGG TGCGCTCGCT CTGTTCGGCG GCTGGACCGG CGTCGATCTC
GCGGGCATTC CCCCCGATGC GCCGTTGGTG CACGTGAGTA CCGATGCCAA CCGGTCCGCG
CTCGATGCCT TCACCCGCGA CGCTGACCAC GAGTGGACGG TCGGTGAACT CGCTCGTTTC
GTGAGCATCG GAGGGCGCGG TCCGGTGCTG GCGGGGTCGG CGGCGACCGT CGCGGATCAG
TTGCAGCGGT GGCAGGACGA GGCCGATGTC GACGGCTTCA ACTTCATGTA CGTCACGATG
CCCGCTACTT TCGCCGATAT CGCCGAACAC CTCGTGCCCG AGCTGCGGCG CCGCGGACTG
CTCGACGATC CGGTCCGGGG ACCGTCGACG CTGCGGGAGC GGCTCGGGAC GTCCGACGGT
CCGCGGCTGC CGAAGTCTCA CTACGCGCGC CGAATCGGGA TCGGCGCACC TGCACGTTAG
|
|---|
| Protein sequence | MSRPLLLSAF AMACVGHQSA GLWTRPEDRS THYTELDHWI SLARLLDDAG FHALFLADVL
GTYDVYGGTR DEAVRSALQV PVNDPILAIS AMAAATRNLG FGVTVSTTYE QPYALARRMT
TLDHLTRGRI GWNVVTGYLD SAAKNLGFTA QIPHDQRYDI ADEYLEVCYK LWEHSWTDAA
VVADRATGVY ARPDQVRDID HHGEYFTVPG AFLCEPSPQR TPVIFQAGSS PRGRRFAGRH
AEAVFVIGPT PAAVRSTVAA VRAEAEAAGR DPRSVRIIAG LTAVVRATDE EAEEALSEYR
HSASESGALA LFGGWTGVDL AGIPPDAPLV HVSTDANRSA LDAFTRDADH EWTVGELARF
VSIGGRGPVL AGSAATVADQ LQRWQDEADV DGFNFMYVTM PATFADIAEH LVPELRRRGL
LDDPVRGPST LRERLGTSDG PRLPKSHYAR RIGIGAPAR
|
|---|
| |