Gene Tpau_3995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3995 
Symbol 
ID9158177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp4125211 
End bp4125804 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648905 
Protein GI296141662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.200757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGG GCGACAGAAC ACGGGCGCGC AGCGTCGAGC GCTTCCTGGA CGCGGGACTC 
GCCGTGTTCG CCGAGCGCGG CTTCCACGCC GCCTCGATGG ACGAGATCTG CACCCGTGCC 
GGGCTCTCCC GCGGCGCCTT CTACTCCAAC TTCCCGGGTA AGGAGGCCCT GTTCCTCGCA 
CTGTTCGACC GCCACGCCGA ACACCAGATC GGCCGCATCG CCGCTGCCAT CGACGCGGCA 
CCCACGCTCG ACGAGGCGAT CGCCAGCGCC GCGCTCGCCG CCGGCGCCGA CGATCCGAAC 
GAGCGCCGCT GGTCGCTACT CACCACCGAG TTCACCATCT ACGCCGCGCG TGACGACGAG 
GCCGCGGCCA GGCTCACCGC GCACGACCGC GCCGTGCGAG CCCGGCTCGC CGACGCGATC 
GCCCGGTTCG ATGTGCCACC CGCGGACGCG GAGGCGTTGG CCCGCTTTGC GATCGCGCTC 
TACGAAGGCG TGATGACGAC TCGCCTGGTC GACGGCGATT CGGCCGCTGC ACACGGGCTC 
CTCACCCGGT TCCTCCCGGC CGGCCTGAGC ACACTGGCAC GCGAACCGCG CTAG
 
Protein sequence
MAKGDRTRAR SVERFLDAGL AVFAERGFHA ASMDEICTRA GLSRGAFYSN FPGKEALFLA 
LFDRHAEHQI GRIAAAIDAA PTLDEAIASA ALAAGADDPN ERRWSLLTTE FTIYAARDDE 
AAARLTAHDR AVRARLADAI ARFDVPPADA EALARFAIAL YEGVMTTRLV DGDSAAAHGL 
LTRFLPAGLS TLAREPR