| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3991 |
|---|
| Symbol | |
|---|
| ID | 9158173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 4121075 |
|---|
| End bp | 4122241 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding domain protein |
|---|
| Protein accession | YP_003648901 |
|---|
| Protein GI | 296141658 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.730708 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCACCG CAGCGCACCG CGCCGTCATT CGCGACACCC TGTCCGCCGT GGGCGGTGCG
ATCGACACGA TCACACCGAA CTTCTACCGT CGCCTGTTCA CCGCCCATCC GGAACTGGAA
CGTGATCTGT TCAATCGCGG TAATCAGGCG GTCGGTGCGC AACAACGCTC ACTGGCGGCG
TCGATCGCCA TGTACGCCAC CGCAGTCATC GATGACTCGG TCGATGCATC GTCGTTGCTC
GAACGGGTCG CGAACAAGCA TGCTTCGCTC GGTGTGGCAC CGGAGCAGTA TCCGGTGGTG
TACGAGCACC TGTTCGCGGC CATCGCCGAG GTGCTCGGCG AGGCCGTGAC CGCGGAGGTG
GCTCAGGCGT GGACCGCGTT GTACTGGCAG CTGGCCGAGG AACTGATCGC CCTCGAAGCC
GGACTGTATC GCCGTGCCGG GGTCGCGCCG GAGTCGGTGT GGCGCACGGT CGAGGTGGCC
GAGCGCCGGC AGGAATCGCC GCATACCGTG GCCTTCGTCC TGGCCGACCC CGACGGCTTT
CCTCTCCCTG AATTCGCGCC CGGACAATAT ATCTCGGTAG CAGTGCCACT TCCGGACGGA
GCCCGTCAGG TTCGGCAGTA CAGCCTTTCC GGGGCGGGTA CCGGTCGCTG GCGGATCGGG
GTTCGACGAG ACGGAGAGGT CTCGACGCAC CTGCACGAGT ACGCCTTCGA GGGGACGCGG
TTGTCAGTGT CGCCTCCCTT CGGCGACATC GTGCTCGACA GCGATCCTTC GGTACCGCTG
GTGCTCGCCT CCGCGGGAAT CGGCATCACG CCCGTGCTCG GCATGCTGTA CCACCTCGCC
GAGGAGGGGC AGGGGCGGTG CGTCACGGTG GCGCACGCCG ACCGCACGCG GGCGACACAC
GCGCACCGCA CCGAACTGTC CGAGCTGGTG CAGCGGATTC CCGGTGCCAC GTTGCACGTC
TGGTACGACG GCCTTCCCGA TCGGTATCCG CTCTCTGACG GTGAGCACCG CGGACGCATC
GACGTCTCGG CGCTGACCGT TGAGCCCGAT ACCCACGCCT ACCTGTGCGG TCCGATGCCG
TTCATGACGG GGCTCGCAGA CCAGTTGGAA CGACGAGGAT TACCGCGCGA GCAGGTGTGG
TTCGAAGCGT TCACTCCCAC GGTGTGA
|
|---|
| Protein sequence | MLTAAHRAVI RDTLSAVGGA IDTITPNFYR RLFTAHPELE RDLFNRGNQA VGAQQRSLAA
SIAMYATAVI DDSVDASSLL ERVANKHASL GVAPEQYPVV YEHLFAAIAE VLGEAVTAEV
AQAWTALYWQ LAEELIALEA GLYRRAGVAP ESVWRTVEVA ERRQESPHTV AFVLADPDGF
PLPEFAPGQY ISVAVPLPDG ARQVRQYSLS GAGTGRWRIG VRRDGEVSTH LHEYAFEGTR
LSVSPPFGDI VLDSDPSVPL VLASAGIGIT PVLGMLYHLA EEGQGRCVTV AHADRTRATH
AHRTELSELV QRIPGATLHV WYDGLPDRYP LSDGEHRGRI DVSALTVEPD THAYLCGPMP
FMTGLADQLE RRGLPREQVW FEAFTPTV
|
|---|
| |