| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3977 |
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| Symbol | |
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| ID | 9158159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4094868 |
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| End bp | 4096319 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_003648887 |
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| Protein GI | 296141644 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.134146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTGA TTGATTCGGC GGCCGACCCA GCGCCGCCGC AGTCCACCTC GCCGCCGAAG
CGGCCGGGGT GGCGGGCCGC GATACTGCGG CTGCACTTCT ACGCGGGCCT GCTGGTGGGC
CCGTTCATCC TGATCGCCGC GATCAGCGGC GGGCTCTACG CGGCCGCTCC CACCGTGGAA
CGGTTCGTCT ACTCGAACGA ACTCACCGCG GCCACGACCG GTCCGGCACA ACCGCTCACC
GCCCAGGTGG CGGCCGCCCA GGCAAGTCGA CCCGATCTCG TGGTCAAGGG CCTCCGGCCG
GCCGAGGAGG CCGGTAAGAC CACGCGAGTG CTGTTCACCG ACCCAACCCT GACCGACGGT
CGTGATCTCG CCGTCTTCGT CGATCCCGCC TCGGCACAGG TGCAGGGCGC GCTCCCGGTG
TACGGGTCGG TCGAGGCGCT GCCGATCCGG TTCTGGATCG ATCGCCTCCA TGTGGACCTA
CACCTGGGCG ATGTGGGCCG GTTCTACAGC GAGCTGGCGG CATCGTGGTT GTGGGTGGTC
GCTCTCGGCG GCATCTACCT GTGGTGGCGG GCCCGCCGCG GCGACGCCCG CGCGATGCTG
GCCTACGACC GGTCCCGCCC GGGACGCGGC GGCGCGATGA ATCGGCACGC GGTGATCGGC
ACCTGGCTGC TGCTGAGCCT GCTGTTCTTC TCGGCGACGG GGCTGACCTG GTCGAAGTAC
GCGGGCGACA ACATCGCCCA GCTCCGCACC GAGCTCAGTT GGACCAAGCC GACGCTGTCG
ACGTCGTTGC AGCCCGAGGC GAAGTCCGAG GGCGGGGGCG AGCACGCCGA TCACGGCGGT
GCCGCGCCGG CGGCCGCACC GGTGAGCCCC GAACTGGCGG CACAGACCCG CGCCCGCAAC
ATCGCCGCGC TCGACCGGGT GGTGGCCGCG GCGGCGGACC GAGGTGTGGG CGGCGCCGTC
CAGGTGTCCA TCCCGGCCGA CCCGGCGGTA GCGATGACGG TGGCGCAGAC CCGCCAACCG
TGGCGGTTCG GCATCGATTC CGCGACCGTG AACCCCGAGA CGGGTCAGGT GGTGACGGTA
CTCGCCTTCG CATCCTGGCC GCTGATGGCG AAGCTCACCG AGCTGCTCAT CAACACGCAC
ATGGGCTGGC AGTTCGGTCT GCTCAACCAG ATCGTATTGG TTGCCTTCGC AACGCTTTTG
AGCGTGCTGA TCGTGCGGGG CTACGCGATG TGGTGGCAGC GCCGGCCCCG TGGCGGCGGT
CTCCCGCGCC CGCCCGCCCG CGAATCCCTG CGGAAAGTCG ATCCCGCCCA AGCGATTCCG
GCAGTGCTGG CGGTCGGATT CGTGGGTTGG TTCCTCCCGG TGCTGGGCAT CTCACTGCTC
GCCTTCGTAC TCGTCGATGT TGCGATAGGC GTGGCTAAGA GGGGGACGGC TAACCTAAGA
AATAGGCCCT GA
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| Protein sequence | MSLIDSAADP APPQSTSPPK RPGWRAAILR LHFYAGLLVG PFILIAAISG GLYAAAPTVE
RFVYSNELTA ATTGPAQPLT AQVAAAQASR PDLVVKGLRP AEEAGKTTRV LFTDPTLTDG
RDLAVFVDPA SAQVQGALPV YGSVEALPIR FWIDRLHVDL HLGDVGRFYS ELAASWLWVV
ALGGIYLWWR ARRGDARAML AYDRSRPGRG GAMNRHAVIG TWLLLSLLFF SATGLTWSKY
AGDNIAQLRT ELSWTKPTLS TSLQPEAKSE GGGEHADHGG AAPAAAPVSP ELAAQTRARN
IAALDRVVAA AADRGVGGAV QVSIPADPAV AMTVAQTRQP WRFGIDSATV NPETGQVVTV
LAFASWPLMA KLTELLINTH MGWQFGLLNQ IVLVAFATLL SVLIVRGYAM WWQRRPRGGG
LPRPPARESL RKVDPAQAIP AVLAVGFVGW FLPVLGISLL AFVLVDVAIG VAKRGTANLR
NRP
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