Gene Tpau_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3954 
Symbol 
ID9158135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4075299 
End bp4075592 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content62% 
IMG OID 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_003648865 
Protein GI296141622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTAAGC CGTATCCGAA GGAGTTCCGC GACGATGTGG TCCGTGTCGC GCGTAATCGT 
GAGCCGGGAG TCCGTCTCAA GCAGATCGCT GCCGACTTCG GCATTAGCGA GTCGTGCCTG
ATGAACTGGG TGAAGACCGC CGATGTCGAG GCCGGCTCCA AGTCCGGGAG CAGTGCGGCG
CAGTCGGCGA CCGAGAGGCA AATGCGTAAG CGGATTCGGC TCCTTGAGCA GGAGAATGAG
GTCCTGCGTC GTGCGGCTGC GTATCTGTCG CAGGCGAACC TGCCGGGAAA ATGA
 
Protein sequence
MPKPYPKEFR DDVVRVARNR EPGVRLKQIA ADFGISESCL MNWVKTADVE AGSKSGSSAA 
QSATERQMRK RIRLLEQENE VLRRAAAYLS QANLPGK