| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3953 |
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| Symbol | |
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| ID | 9158134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4073245 |
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| End bp | 4074702 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003648864 |
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| Protein GI | 296141621 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACA GCCCGCAATC CGATCCGCCG AGGGCGGTCG ACGACGCGCC GTCCGGCGAG
CACCTGCTGC AGCGTGGCCT CGGCATCGGA TCGATCGTGT TCATGGTGGT CGCGGCGGCG
GCACCGCTCG CCGTCGTGAC GGCGAGCGTC CCGATCATCA TCTCGGTGAG CGGGAGCGCG
GCAGCGCCAC AATTCTTCCT GATCGCGATG TGTGTACTCG CCCTATTCTC CGTCGGGTTC
ACAGCGATGA GCAGGTACGT GCCGAACGCG GGCGCGTTCT ACTCGTACAT CCAGCGCGGA
CTGGGCCGTC ACGCGGGAGT CGGGGCGGCA ACGCTGGCGC TGGGCTCGTA CGGGGTGATG
CAGATCGGGC TGTATACCTA CATGGGGGTC GCGACGTCGA AGCTGTTGTC CACGATGGAT
ATCGGGCTCC CGTGGTGGAC GTGCTCGCTC GCGTGGGTAT CGATCGTCGG CGTCCTCGGC
TACCGCGACA TCGAGCTCAG CTCGAAAGTG CTCGGCGTGC TACTGGTCGC GGAGACGCTG
GCCGTTGTGG TCATCGAGGT CGGCGTGATC AGTGCGGGCG GGGCCGGCGG ACTGGACCTG
GTTCCGCTGT CTCCCAGTGA GTTCGCCACC GGCGCACCGA GCCTCGGGCT GATGTTCGGG
TTCTTCAGCT TCATCGGATT CGAGGCCACG GCCGTGTTCC GCAACGAGGC CCGCGATCCG
GAGCGGACGA TTCCCCGGTC GACCTATGCC GCGGTGGTCT TCATCGGCCT GTTCTACGCC
TTCGCGGCGT GGGCGGTGGT GGAGGGACTC GGCGTCGGGC ACGCGGTCGA GGCGGCGAAG
GCCGATCCCG GCAACCTAGT GCAGAACCTG GCCAGCGAGT ACGTTTCACC GATCCTCACC
GACGTCATCC AGGTGCTGCT CGTGACCAGC TTCTTCGCGT GCGTGCTCTC GTTCCACAAC
GTGATCACCC GCTACCAGTT CACGCTGGCG ACGAAAGGAC TACTGCCGCA GTCCCTCGCC
GAGATCAGCC CGCGCCACCG CACCCCGTCG AAGTCGTCGC TGACGTTCAC CGTGGTCTCT
CTGGTGGCGG TGGCGGCCGT CGCGGCGGTG GGCTGGGATC CCGTGGCCCA GACGTACATG
TGGTCGTCGG GGGCGTCGAC GCTCGGCCTG ATCGCGCTGA TGGCGATGAC CAGCCTGGCG
GTGATCATCT TCTTCCGGAC GCGGGTCCGC AACCAGGGCC GGTGGCGGAC GCTGGTCGCG
CCGGGGCTGT CGTTCCTTGG GCTCACCGCG ATCCTGCTCC TGGTGATCGC CAACTTTCCG
GTGCTCGTGG GCACCACCAC CACCGCGGTG GTGCTCGGCG TGATCATCCT CGTGACCTTC
CTCGCCGGCG TCGTTGCCGC CGAGCGACTG CGCCGCACCC GCCCTGAGCA CTATCAGGCT
CTGCTACACG AGGACTGA
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| Protein sequence | MINSPQSDPP RAVDDAPSGE HLLQRGLGIG SIVFMVVAAA APLAVVTASV PIIISVSGSA
AAPQFFLIAM CVLALFSVGF TAMSRYVPNA GAFYSYIQRG LGRHAGVGAA TLALGSYGVM
QIGLYTYMGV ATSKLLSTMD IGLPWWTCSL AWVSIVGVLG YRDIELSSKV LGVLLVAETL
AVVVIEVGVI SAGGAGGLDL VPLSPSEFAT GAPSLGLMFG FFSFIGFEAT AVFRNEARDP
ERTIPRSTYA AVVFIGLFYA FAAWAVVEGL GVGHAVEAAK ADPGNLVQNL ASEYVSPILT
DVIQVLLVTS FFACVLSFHN VITRYQFTLA TKGLLPQSLA EISPRHRTPS KSSLTFTVVS
LVAVAAVAAV GWDPVAQTYM WSSGASTLGL IALMAMTSLA VIIFFRTRVR NQGRWRTLVA
PGLSFLGLTA ILLLVIANFP VLVGTTTTAV VLGVIILVTF LAGVVAAERL RRTRPEHYQA
LLHED
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