| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3944 |
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| Symbol | |
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| ID | 9158125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4064180 |
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| End bp | 4065625 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | Carotenoid oxygenase |
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| Protein accession | YP_003648855 |
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| Protein GI | 296141612 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC ACAAGCAGAT CGGCGTCGAT CGGTCCCGCG TCTTCGAGCC GGCGGCGGGT
GAGTTCGACG ACGTGCTGAT CGAGGACATC ACCGGCGCGC TCCCCGAGGA TCTGCTCGGG
ACGCTGTACC GCAGCGCACC GGTGCGCTGG GAAGCCGGCG GCTTCTACGC CAAGCACCTG
TTCGACGGTG ACGGGATGGT CGCGAAGTTC TCCCTGGAGG GCGGCCGGCT GCGGTACCGG
AACCGGTACG TCCGCACCCC CAAGTACCAG CGGGAGGAGG CCGGGCGAGG GGACCGAGTA
CGTGGGCTCG GCACCCTCGC CGCGGGGGGT CCACTCGGTA ACGCGGGTCG CGGCCCCGCT
GATCGCGCCA ACACCACGTC GATCTACCAC GGTGACCGGC TGGTCGCGCT CTCCGACGAC
GGCCGGCCGT GGGAGCTCGA TCCCGACTCG CTGGCGACGC GCGGTCGGTG CGATTTCGAC
GGCGCGCTGA GCCTGTTCAG CACGTTCTCG CCACACCCGA AGCTCGATCC GGTCTCGGGC
GAGATGTTCA ACTTCGGCCT CACGCTGCCG CCGGTGGGAC GCAGCACCGG CATGGTGGGC
CTGCGCTGCT ACCGGGTCGA TCCGCGCGGT CGGCTGAGCA CGATCCGCAC AGTGCCGCTC
TCGCACGTGC TGATCAATCA CGACTTCGCG ATCACCGAGC GGTACCTGGT GTTCGTCCTG
GACCCGCTGA CCGTGGGGAC GGTCGCGACG GCGCGAGCCG GCCTGGGCAT GATCGACTTC
AACGCGGCCA CCGAGTTCCG CGCGGAGCTC GGGTCCGAAG TGATCCTGGT GCCACGGGAC
GGCGGTGAGC CGCGCCGGTT CACCATCCCC GCGTTCCCGA AGGTGCACGT GAACAACGCC
TACGAGGTGG GCGGCGACGT GCTGATCGAT GTGGTCAAGT ACGACGACTG GAACGAGACC
GCGCGGATGC TCTGCGACTT CCGCGAATAC GGCCCTGCTC GGGGCGGCAC GCTCACGCGG
TTGCGGATCA CGCCGAGCGA TCGGGTGGAA CTCACCGAGC TATCGGCCTC GCTGGGCGAA
TTCCCGATGC ACGACTGGCG CCGCACCGGA CGACGATTCC GCTACTCGTA TCTGATGGAG
TCCGACGGGG TGCGTCCGCC GTCGCTGGAG AAGATCGACA ACGAGACCGG CGAGCAGACC
TCGATGGGCG GGTTCGCCTT GTTCGACGGT GTCGGTGAGC CGATCTTCGT GCCGCGCAGT
CCCGATGCCG CCGAGGACGA CGGCTGGCTT CTGGTGGTGG TGTATCTGGC GTCGGACCAC
CGCTCGGCGC TGATCGTCGT GGACGCTCGG GACATCGAGG CGGGGCCGGT GGCGGTAGCA
CGGCTGCCGC ACCACTTCTT CCCCGGATTC CACGGCATGT TCACCGACCG GGTCTCCCTC
ACCTAG
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| Protein sequence | MTTHKQIGVD RSRVFEPAAG EFDDVLIEDI TGALPEDLLG TLYRSAPVRW EAGGFYAKHL
FDGDGMVAKF SLEGGRLRYR NRYVRTPKYQ REEAGRGDRV RGLGTLAAGG PLGNAGRGPA
DRANTTSIYH GDRLVALSDD GRPWELDPDS LATRGRCDFD GALSLFSTFS PHPKLDPVSG
EMFNFGLTLP PVGRSTGMVG LRCYRVDPRG RLSTIRTVPL SHVLINHDFA ITERYLVFVL
DPLTVGTVAT ARAGLGMIDF NAATEFRAEL GSEVILVPRD GGEPRRFTIP AFPKVHVNNA
YEVGGDVLID VVKYDDWNET ARMLCDFREY GPARGGTLTR LRITPSDRVE LTELSASLGE
FPMHDWRRTG RRFRYSYLME SDGVRPPSLE KIDNETGEQT SMGGFALFDG VGEPIFVPRS
PDAAEDDGWL LVVVYLASDH RSALIVVDAR DIEAGPVAVA RLPHHFFPGF HGMFTDRVSL
T
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