Gene Tpau_3942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3942 
Symbol 
ID9158123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4062638 
End bp4063420 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648853 
Protein GI296141610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCGAGG TCAGCCCCCA GTTCGTCCGT CGTGGTCGTG GATTCGACTC TCTCCCCGCG 
GCGGAGGGAC GGTGGGCGCC CGGCACCCTG TCCGGCCCGG CTGTGGCCGG GCTGCTCGCG
CAGGTCCTCG ACACCGAATA CGGCGCGGGA CTCGTGGCCG CGCGCTGGCA CTGCGACCTG
TTCCGCATGG TCAGGGCCGG CCACATCGAG GTCCGCACCC GCCTCGTGCG GTCGGGCCGG
CGGATTCGCG TCGCCGAGGC CGAGGTGATC CAGGACGAGG CAGCCGTGGT GCGCGCCGCG
GTGACCTTCT ATCACCGGGC GCCGCAACCC GACGGCGCCG TCTGGTGCGA TCCCGAGGTG
CCGCGCGCAC CGGTGCCCGT GGCCCCGCGG CTGTCGATGG CGAGTGGCGA CAGCGAGTAC
AGCACCGATC CGGCGCAGTG GCTCAACGCC GAACGCAAGC GGGTGTGGGC CGTGGGCTGG
CGGGTGCTCG ACGGCGAGGA GACCACCCCG TTCGCGCGCG CCGCGATGGT CTCGGACACC
ACGAATCTGG TGTGCGGCAT GGGAACCGGT GGGGTGCAGA CGATCAACGG AGACGTGTCC
ATGGCGCTCG CCCGCGCCCC GATCGGCGAC GAGATCGGCC TGGAGGCCGA TCATCACATG
GTGATCGACG GTGTCAGCGC CGCCTCGGCG AGCATGTTCG ACCGTGCGGG CCGGTTCGGA
GTGTGCACCG TGACCGGGGT GGCCACCGGA TCCGCCGTCC ACGGGCCGAA GGAGTCTCGA
TGA
 
Protein sequence
MSEVSPQFVR RGRGFDSLPA AEGRWAPGTL SGPAVAGLLA QVLDTEYGAG LVAARWHCDL 
FRMVRAGHIE VRTRLVRSGR RIRVAEAEVI QDEAAVVRAA VTFYHRAPQP DGAVWCDPEV
PRAPVPVAPR LSMASGDSEY STDPAQWLNA ERKRVWAVGW RVLDGEETTP FARAAMVSDT
TNLVCGMGTG GVQTINGDVS MALARAPIGD EIGLEADHHM VIDGVSAASA SMFDRAGRFG
VCTVTGVATG SAVHGPKESR