Gene Tpau_3930 details

Gene Information

• Locus tag: Tpau_3930
• ID: 9158111
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 4052649
• End bp: 4053419
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 69%
• Product: endonuclease III
• Protein accession: YP_003648841
• Protein GI: 296141598

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCAGG AGCCCGAGTC CCACCTCGCG CTGGTGCGTC GGGCCCGGCG GATGAATCGG 
ACCCTGGCGA CCGCGTTTCC GCACGTCTAC TGCGAGCTGG ACTTCACCAA CCCGCTCGAA 
CTCTCCGTCG CGACGATCCT CTCGGCGCAG TGCACCGACG TCCGGGTGAA TCAAGTCACA 
CCGGCCCTGT TCGACCGGTA TCGCAGCGCC GCCGACTACG CCGGCGCCGA ACGCGCCGAA 
CTCGAGGAGT ACATCCGCTC CACGGGCTTC TACCGCAACA AGGCCACATC GATCATGGGC 
CTCGGCCAGG CCCTGGTGGA CCGCTTCGAC GGCGAGGTGC CGCGCCGGAT GAAGGATTTG 
GTGACGCTCC CCGGTTTCGG CCGTAAGACC GCGAACGTGG TCCTCGGCAA CGCCTTCGAC 
GTGCCGGGCA TCACCGTGGA CACCCACTTC AGCCGGCTGG TGCACCGCTG GGAGTGGACG 
CAGGAGAACG ATCCGGTGAA GATCGAGCAC GCCGTCGGCG AGCTGATCCC GCGCAAGGAG 
TGGACCCTGC TCAGTCACCG CGTGATCTTC CACGGACGCC GCGTCTGCCA TGCCCGCAAG 
CCCGCGTGCG GGGTGTGTGT CCTGGCCAAG GACTGCCCGG CGTACGGCAC CGGCCCCGTC 
GATCCGGCGG AGGCCGCCGA TCTCGTCAAA GGCCCCGAGC GCGAGCACCT GTTGGAGATC 
GCGCCACCCC CGCCGCGCCG CCGCCGCGCC GCGTCCGGGG GCATCCGATG A 

 

Protein sequence

MPQEPESHLA LVRRARRMNR TLATAFPHVY CELDFTNPLE LSVATILSAQ CTDVRVNQVT 
PALFDRYRSA ADYAGAERAE LEEYIRSTGF YRNKATSIMG LGQALVDRFD GEVPRRMKDL 
VTLPGFGRKT ANVVLGNAFD VPGITVDTHF SRLVHRWEWT QENDPVKIEH AVGELIPRKE 
WTLLSHRVIF HGRRVCHARK PACGVCVLAK DCPAYGTGPV DPAEAADLVK GPEREHLLEI 
APPPPRRRRA ASGGIR