Gene Tpau_3928 details

Gene Information

• Locus tag: Tpau_3928
• ID: 9158109
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 4051274
• End bp: 4051978
• Gene Length: 705 bp
• Protein Length: 234 aa
• Translation table: 11
• GC content: 72%
• Product: NUDIX hydrolase
• Protein accession: YP_003648839
• Protein GI: 296141596

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGCCC CTGCCTGGCT GATGCCGCTG CTCGGAAACC TCGATGACAT CGGCGACGAG 
CTGCAGCGCC GCGGTGGCGC CGTCGCCGCC CTGCAGCGCG TGCGCAATCC GCGCCGCGCC 
GCCGTCCTGA TCCTGTTCGA CGGTGACCGA ACCGCCGCGA CCCTGCCCGA CGACGCCACG 
GTCCTGTTGC AGCAGCGGGC CTCGGCGCTG CGGCAGCACT CGGGCCAGGT GGCCTTCCCC 
GGCGGCGCCC GCGATCCCGA GGACGCCGAC GATGTGGCCG TCGCTCTCCG CGAGGCCTGG 
GAGGAGACCG GGCTCGATCC CTCGTCGGTG GACGTGCTGG CCGTGCTCGA CCCGATCGAG 
GTGCCGGTCT CGGGATTCCT CGTGGTCCCG GTGATCGGCT TCGCGGCGCG CCCCTCGGCG 
GTGCACGTGG TGGACGAAGG CGAGACCGCG CTGGTCCGGA AGGTACCGCT GGCCGAACTC 
ACCGATCCCG CGAACCGGTT CATGGTGCGC AAATCCTTCT ACAAGGGCCC CGGTTTCGCC 
GCGGGGCCGA TGCTGGTGTG GGGATTCACC GGCGGCCTGA TGAACGCGCT GATCGCCGCC 
GCCGGCTGGG AACGCCCGTG GAACTCCCAC GATGTGCGGC CCCTCACCGA CGAAGTGCGG 
GCCGCAGCCC TGCGCGCACA GGCCTGGCAG GAAGAGGTGC GATGA 

 

Protein sequence

MTAPAWLMPL LGNLDDIGDE LQRRGGAVAA LQRVRNPRRA AVLILFDGDR TAATLPDDAT 
VLLQQRASAL RQHSGQVAFP GGARDPEDAD DVAVALREAW EETGLDPSSV DVLAVLDPIE 
VPVSGFLVVP VIGFAARPSA VHVVDEGETA LVRKVPLAEL TDPANRFMVR KSFYKGPGFA 
AGPMLVWGFT GGLMNALIAA AGWERPWNSH DVRPLTDEVR AAALRAQAWQ EEVR