Gene Tpau_3921 details

Gene Information

• Locus tag: Tpau_3921
• ID: 9158102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 4037908
• End bp: 4038480
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 70%
• Product: Uracil-DNA glycosylase superfamily
• Protein accession: YP_003648832
• Protein GI: 296141589

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGATTCA CACGCGAGCA ACTCCTGGCG TACGCGGGCA CGACGGTGCC CGACCTGGTC 
GGTCCGGACT GCCGGCTGCT GTTCGCCGGA ATCAATCCGG GACTGTGGAC GGCCGCCACC 
GGTGCCCACT TCGCCCGGCC CGGCAACCGC TTCTACCCCG CCCTGTACGC GGCAGGCATC 
ACCGATCACG TCATCGATGC GTCGATGGGC ATGCGCGAGG CGGATCGCGA GGCCCTGATC 
GCGGCCGGCG TGGGAATCAC CAATGTCGCT CCGCGGGCCA CCGCGAAGGC CAGCGAGCTC 
ACCCCGACGG AACTGCAGGA CGGCGGTCGG GCGCTGGTAT CTCGGGTCGA ACGGATTCGG 
CCGCGCGTAC TCGCCGTGCT CGGCATCACT GCGTACCGAT CGGCATTCGG GTCGCCACGC 
GCAACCGTCG GTCTGCAACC GGACCCCCTG GGGAGTACCC AGGTATGGGT ACTCCCGAAC 
CCCAGCGGCC TCAACGCCCA CGAGACGATC GACACCCTGG CGGCGGCGTA CCGGTCCGCC 
GCCGCGGCGG CGGGCGTTCT CACCTCGCTG TGA 

 

Protein sequence

MGFTREQLLA YAGTTVPDLV GPDCRLLFAG INPGLWTAAT GAHFARPGNR FYPALYAAGI 
TDHVIDASMG MREADREALI AAGVGITNVA PRATAKASEL TPTELQDGGR ALVSRVERIR 
PRVLAVLGIT AYRSAFGSPR ATVGLQPDPL GSTQVWVLPN PSGLNAHETI DTLAAAYRSA 
AAAAGVLTSL