Gene Tpau_3916 details

Gene Information

• Locus tag: Tpau_3916
• ID: 9158097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 4032739
• End bp: 4034685
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 66%
• Product: acetate/CoA ligase
• Protein accession: YP_003648827
• Protein GI: 296141584

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGATT CCGCGACCTC CGCGTACCCG CCCTCCGCAG ACTTCGCAGC TCAGGCCAAT 
ACCCATGGCA GAGAATTGTA CGACCGTGCC GAAGCAGACC GCTTGGGATT CTGGGCCGAG 
CAGGCGAATC GGCTGGATTG GGACACCCCG TTCGGCGAGG TCCTGGACTG GTCGGGTGCC 
CCCTTCGCGA AGTGGTTCGT GGGCGGCAAA CTCAACGTGG CGTACAACTG TGTCGATCGG 
CACGTGATTG CCGGCAACGG CGATCGAGTG GCCATCCACT GGGTCGGCGA ACCCGGCGAT 
ACTCGCGATA TCACCTACGC CGACCTGCAG GCCGAGGTCA GCCGCGCCGC CAACTACCTC 
AGCTCGCTGG GCCTGAACGC GGGCGACCGC ATCGCGATCT ACATGCCGAT GGTCCCCGAG 
GCCATCGTCG CGATGCTCGC CTGTGCCCGC CTGGGCCTGA CGCACTCCGT GGTCTTCGGC 
GGCTTCTCCG CGGGCGCCCT GCGCTCGCGC ATCGATGATG CCCAGGCGAA GGTCGTGATC 
ACCACCGACG GTCAGTTCCG TCGCGGTAAG CCCGCACCGC TCAAGGCGAA CGTCGACGAG 
GCCCTGGACA TGGACGTCGA CGGTGCGAAA GCCACCTCGG TCGAGAAGGT CATCGTCGTG 
CAGCGATGCA CGAACGACAT CGACTGGCAC GACCGGGATG TGTGGTGGCA CGAGTCGGTC 
GGTGCCGCGT CGCCGGAGCA CACCCCCGAG GCGTTCGACG CCGAGCACCC TCTGTTCCTG 
CTGTACACCT CCGGCACCAC CGGTAAGCCC AAGGGCATCG TGCACAGCTC CGGCGGCTAC 
CTCACCCAGG CCGCGTACAC GCACTACTAC CTCTTCGACC TCAAGCCCGA GAAGGACGTG 
TACTGGTGCA CGGCCGATAT CGGTTGGGTC ACCGGGCACA CCTACATCGT GTACGGACCG 
CTCGCGAACG GTGCCACCCA GATCGTCTAC GAGGGCACCC CGAACTCGCC GACGGAACAC 
CGTCATTTCG AGATCATCGA GAAGTACGGC GTCTCGATCT ACTACATCGC CCCCACCCTG 
GTGCGCACGT TCATGAAGTG GGGCAGGGAG ATTCCCGATG CCCACGACCT CCGTTCGATC 
CGCGTACTCG GTTCGGTGGG CGAGCCGATC AATCCCGAGG CGTGGCGCTG GTACCGCGAG 
GTGATCGGTG CGGGCACCGC ACCCATCGTC GATACCTGGT GGCAGACGGA GACCGGTGCC 
GCCATGGTCG CCCCGTTGCC GGGTACCACC ACACTCAAGC CCGGTTCGGC GATGGAGCCG 
GTCCCCGGCA TCAGCGCCAA CATCGTCGAT GACGACGGAA ACAGTCTGCC CCGTGGCGAA 
TCCGGCCTCC TCGTACTCGA CGAGCCGTGG CCGGCGATGC TGCGCGGTAT CTGGGGCGAT 
CCGGAACGGT TCGTGGACAC CTACTGGTCG CGCTACGCCG ATCAGGGCTG GTACTTCGCG 
GGCGACGGTG CGCGGTACGA CGAGGACGGC GCCCTCTGGG TGCTGGGCCG CGTGGATGAC 
GTCATGAACA TCTCGGGCCA CCGGATCTCC ACCGCCGAAG TCGAATCGGC ACTCGTCGGC 
CACCCCGCCG TCGCCGAGGC CGCCGTCGTG GGCGCATCCG ATGCGACCAC CGGCCAGGCG 
ATCGCGGCGT TCGTCATCCT CCGCCAGGGC GTGGACGACT CCGATCCCGA CAGGCTGATC 
ACCGAGATGA CGGCACAGGT CTCCAAGGAC ATCTCCCCGA TCGCCAAGCC GCGCGAGATC 
AACATCGTGC CCGAACTGCC GAAGACGCGC TCCGGCAAGA TCATGCGCCG CCTCCTCCGC 
GATGTGGCCG AGGGCCGCGA GCTGGGCGAT ACGTCCACGC TGGTCGATCC CACCGTCTTC 
GAGAACATTC GGAAGCGAAA GAGCTAG 

 

Protein sequence

MTDSATSAYP PSADFAAQAN THGRELYDRA EADRLGFWAE QANRLDWDTP FGEVLDWSGA 
PFAKWFVGGK LNVAYNCVDR HVIAGNGDRV AIHWVGEPGD TRDITYADLQ AEVSRAANYL 
SSLGLNAGDR IAIYMPMVPE AIVAMLACAR LGLTHSVVFG GFSAGALRSR IDDAQAKVVI 
TTDGQFRRGK PAPLKANVDE ALDMDVDGAK ATSVEKVIVV QRCTNDIDWH DRDVWWHESV 
GAASPEHTPE AFDAEHPLFL LYTSGTTGKP KGIVHSSGGY LTQAAYTHYY LFDLKPEKDV 
YWCTADIGWV TGHTYIVYGP LANGATQIVY EGTPNSPTEH RHFEIIEKYG VSIYYIAPTL 
VRTFMKWGRE IPDAHDLRSI RVLGSVGEPI NPEAWRWYRE VIGAGTAPIV DTWWQTETGA 
AMVAPLPGTT TLKPGSAMEP VPGISANIVD DDGNSLPRGE SGLLVLDEPW PAMLRGIWGD 
PERFVDTYWS RYADQGWYFA GDGARYDEDG ALWVLGRVDD VMNISGHRIS TAEVESALVG 
HPAVAEAAVV GASDATTGQA IAAFVILRQG VDDSDPDRLI TEMTAQVSKD ISPIAKPREI 
NIVPELPKTR SGKIMRRLLR DVAEGRELGD TSTLVDPTVF ENIRKRKS