| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3908 |
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| Symbol | |
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| ID | 9158089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 4022826 |
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| End bp | 4024007 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003648819 |
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| Protein GI | 296141576 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA TGAGCGGCGA TCTGCTGGCG CGCGTGCGCG AACGGCTCGC CCATACCGCG
ACCGTGCTCA CCCCGGACGT CATGGCGGCG GCTCTGCGCG CCGAATGCGG TGGTGTTCTG
GGCGATACCG AACTGCTGGA CGGCCTGGCG TATCTGGAGA CCGAATTGGT GGGCGCGGGG
CGGCTGGAAC CATTGCTGGC CGATCCATCG GTGGCCGATG TCCTGGTCGC CGGCCCCGGC
CGGGTATGGA TCGACCGCGG GGCGGGGCTC GAACTCACCG ACGTGGTGTT CGAGGACGAC
GATGCGGTGC GCCGCCTCGC GGCGCGGCTC GCGCTCGCGG CGGGACGCCG GATCGACGAT
GCGCAGCCCT GGGTCGACGG GCACCTTCCC TCGGGTCCGG GCGGCCGCGC GGGCAGCGGA
ATCCGGCTGC ATGCGGTGCT GCCGCCGCTC GCTCACGGTG GCACCTGCAT CTCACTGCGG
GTACTGCGCC CGGCCACGCA GAGCCTCGAC GCATTGATCG CCGCGGGTGC GGTGCCCGAT
GAGGTCGCAC CGCTGGTGCG GGCGGTGGTG GCGGCGCGGC TGGCCTTCCT GGTGGTCGGC
GGTACCGGCA GCGGGAAGAC CACCCTGCTC AACGGGCTTC TCGGTGAGGT GGCCACCGGC
GAGCGTGTGC TCTGTGTCGA GGACGCGCAC GAGCTGGATC CGGTGCACCC GCATGTGATT
TCACTGATCG CGCGCGGCGC CAACGTGGAG GGCGTCGGCG AGGTCACCGT GCGCGATCTG
GTCCGTCAGT CGCTGCGGAT GCGGCCCGAT CGGATCGTGG TCGGGGAGGT CCGGGGCGCC
GAGGTCGTCG ACCTGCTGAC GGCGCTCAAC ACCGGGCATG ACGGCGGCGC CGGCACGGTG
CACGCCAATT CACCGCGGGA GGTCCCGGCG CGCCTCGAAG CATTGGCGGC GCTGGGCGGT
CTGGGGCGTG AAGCGCTGCA CGCGCAGCTC GCGGCGGCAT TCCAGGTGGT CTTCGCCGTG
CACCGGTGGC CGTCCGGACG GCGCGGACTG CGCAGCATCG GGATGGTCGA GCGCGGGGCC
GACGGCTACG TCCGGGTGCG GCCGGCATGG GAGCGCGACG GCGGATTCGG CGATGCCGCA
GGGGAACTAC GGGGTCTCCT CGATGAACGG GGCGTGCGGT GA
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| Protein sequence | MSAMSGDLLA RVRERLAHTA TVLTPDVMAA ALRAECGGVL GDTELLDGLA YLETELVGAG
RLEPLLADPS VADVLVAGPG RVWIDRGAGL ELTDVVFEDD DAVRRLAARL ALAAGRRIDD
AQPWVDGHLP SGPGGRAGSG IRLHAVLPPL AHGGTCISLR VLRPATQSLD ALIAAGAVPD
EVAPLVRAVV AARLAFLVVG GTGSGKTTLL NGLLGEVATG ERVLCVEDAH ELDPVHPHVI
SLIARGANVE GVGEVTVRDL VRQSLRMRPD RIVVGEVRGA EVVDLLTALN TGHDGGAGTV
HANSPREVPA RLEALAALGG LGREALHAQL AAAFQVVFAV HRWPSGRRGL RSIGMVERGA
DGYVRVRPAW ERDGGFGDAA GELRGLLDER GVR
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