Gene Tpau_3901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3901 
Symbol 
ID9158082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4018315 
End bp4019529 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID 
Producttransposase IS111A/IS1328/IS1533 
Protein accessionYP_003648812 
Protein GI296141569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAGA GCGAAAGTCG TTGGTGGGTA GGGGTAGATG TTGGCAAGGA GTTCCACTGG 
ATGGCTGTCT GCGACGACGC CGGAAAGGTG ATCTCCTCTC GTAAGGTTGC CAACGATGAG
GTCTCGATCG CTGCGGCGAT CACCGAAGTT GAATCTCGCG ATGGCACCGT GTCGTGGACG
GTGGACCTGA CCACCACTTA CGCGACCCTC CTGCTGACGA TGCTCGCCGC AGCCGGGCAT
TCCGTGCGGT ATCTGACTGG TCGCGCCGTC TGGCAGGCCT CGGCGATCTA CCGAGGCGGC
GAGGCAAAGA GCGACGCCAA AGATGCGAGG GTTATCGCAG ACCAGGGGCG CATGCGGGGC
GATGATCTTC CGCTGCTGCG CCCCAACGAT GACCTGGTCA CCGAGCTATC GATGCTCACC
GCTCACCGTG AGGATCTGGT GGCCGACCGC ACCCGCACGA TCAATCGGCT GCGGCAGCAG
CTGGTCGCCA TCAGTCCTGC GCTGGAGCGG GCTGCACAGC CTTCCACCGA TCGCGGGTGG
ATCGCGCTTT TGGCCCGCTA CCAGCGGCCC CAGGCAATCC GCCGATCGGG GATCACACGG
ATCACCCGAG TCCTAGCCGA TGCAGGGGTG CGGAACGCAG GTCCAATCGC CGAAGCCGCC
GTCACCGCGG CTAAGGCGCA GTCGATTACC CTGCCCGGCG AGGCCATCGC CGCAGATCTG
GTAGCCGAGC TTGCACAGGG GGTGATCGAC CTCGATAAGC GGATCAAGGC GGCCGACGCC
GCCATCGAGG AACGGTTTCG CCGCCATCCG CTCGCCGAAG CGATTGTGAG CCTGCCCGGC
ATGGGATTTC GCCTCGGCGC CGAATTTCTA GCCGCCGTCG GCGATACCTC ACGGATTCTC
TCCGCAGATC ATCTCGCGTC GTGGGCCGGC CTCGCACCCG TCACGAAAGA CTCTGGCAAA
CGGACCGGAC GCTTATGCAC GCCCCAGCGC TACCACCGCG GACTGCGCAG AGTGATGTAT
CTGTCAGCGG TGAGCGCTGC TCGCTGGGAT CCCGCCGCCA AAGACTACTA CCAGCGAAAA
CGCGCTCAGG GAAAGAAGCA CGTCCCCGCG ACTATTTGCC TGGCACGCCG CCGCGTCAAC
GTGCTCTACG CCCTCATCCG CGACAACCGA ACCTGGCAGC CAGCCGCCCC GCAAATCACC
GCGGCCGCCG CTTGA
 
Protein sequence
MVKSESRWWV GVDVGKEFHW MAVCDDAGKV ISSRKVANDE VSIAAAITEV ESRDGTVSWT 
VDLTTTYATL LLTMLAAAGH SVRYLTGRAV WQASAIYRGG EAKSDAKDAR VIADQGRMRG
DDLPLLRPND DLVTELSMLT AHREDLVADR TRTINRLRQQ LVAISPALER AAQPSTDRGW
IALLARYQRP QAIRRSGITR ITRVLADAGV RNAGPIAEAA VTAAKAQSIT LPGEAIAADL
VAELAQGVID LDKRIKAADA AIEERFRRHP LAEAIVSLPG MGFRLGAEFL AAVGDTSRIL
SADHLASWAG LAPVTKDSGK RTGRLCTPQR YHRGLRRVMY LSAVSAARWD PAAKDYYQRK
RAQGKKHVPA TICLARRRVN VLYALIRDNR TWQPAAPQIT AAAA