| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3876 |
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| Symbol | |
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| ID | 9158057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3999194 |
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| End bp | 4002100 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003648790 |
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| Protein GI | 296141547 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCAC GCGGGAAGGC AGCAGACGGC GACGGTCTAC AGCGTCTGGT GATCGTGGAG
TCCCCCGCCA AGGGCAAGAA GATCGGCGAT TTCCTGGGGC CGAACTACAC GGTCCGGGCG
TCGATGGGGC ACATCCGCGA TCTGCCCAGC CGCGATAATC CGCTCCCCGA GGCCGATCAG
GGCAAGTCCT GGTCGCGTCT CGGTGTGGAC GTCGATCACG ACTTCGAAGC CCACTACGTG
ACCTCCGCGA GTAAGCGCTC GACGGTGTCC GAACTGAAGT CACTGCTCAA GCAGGCCGAC
GAGCTCTACC TCGCGACCGA CGGTGACCGC GAGGGTGAAG CCATCGCGTG GCACCTCCAA
GAGGTGCTCA AGCCCAAGGT CCCGGTCAAG CGGATGGTGT TCCACGAGAT CACCCAGCAG
GCCATCCAGG CCGCCGCCCA GGAACCGCGC GAGCTCGACA TGAACCTCGT CGACGCGCAG
GAGACCCGCC GCATCCTGGA CCGCCTCTAC GGCTACGAGG TCAGCCCCGT GCTGTGGCGC
AAGGTCAACC AGGGCCTGTC CGCCGGCCGT GTGCAGTCGG TGGCGACGCG CATCATCGTC
GACCGTGAGC GCGAGCGCAT CGCCTTCCGC ACCGCCGGGT ACTGGGATAT CGCCGCCCAG
CTGGACGCCG GCGCCGAAGC CAGCCCCCGC ACGTTCGGGG CGCGACTGGT CAGTGTGGAT
GGCGACCGCG TGGCCACCGG CCGGGATTTC GATGCCCAGG GCCAGCTCAA GAAGCCCACC
GGGATCACCG TGCTCGACGG TACGCGGGCG AACGCCCTGG TCGCGGGCCT GCAGGGCGCG
AACCTCGCCG TCACCTCGGT CGAGGAGAAG CCGTACACGC GCAAGCCCTA CGCGCCGTTC
ATGACGTCGA CCCTGCAGCA GGAGGCGAGC CGCAAGCTGC GGTTCAACAC CGATCGCACG
ATGCAGATCG CGCAGCGCCT CTACGAAGGC GGCTACATCA CCTACATGCG TACCGACTCG
ACCACGCTGT CGGAGACCGC GATCGCCGCT GCCCGCGACC AGGCGCGGCA GCTGTACGGC
GCCGATTTCG TGCACCCGAC ACCGCGGCAG TACACGCGCA AGGTCAAGAA CGCGCAGGAG
GCGCACGAGG CGATCCGTCC CGCGGGCGAG ACCTTCCAGA CGCCCGGCGC ACTGGCGTCC
GTGCTGAACT CGGATGAGTT CCGTCTGTAC GAACTGATCT GGCAGCGCAC CGTCGCCTCG
CAGATGGCCG ATGTCAAGGG CACCACCCTG AGCTTGCGCA TCGGGGGCAC CGCCTCCTCC
GGCGAGAGCG TCGAGTTCGC CGCCTCGGGC CGCACCATCA CCTTCCCCGG CTTCCTCTCG
GCCTACGTCG AGACGGTCGA CGAGCAGGCG GGCGGCGAGG CCGATGACGC CGAATCCCGA
CTGCCGCAGC TCACCAAGGG CCAGCGGGTG ACCGCGGCCG AGCTCACCGC GGCGGACCAC
GTCACCAGCC CGCCCGCGCG CTACACCGAG GCCTCGCTGG TCAAGACGCT CGAAGAGCTG
GGCATCGGCC GCCCGTCGAC CTACGCCTCG ATCATCAAGA CCATCCAGGA CCGCGGCTAC
GTGGTGAAGA AGGGCAACGC CCTCGTCCCG CAGTGGGTCG CCTTCGCCGT GATCGGACTG
CTGGAGGGCC ACTTCGGTGG CCTCGTCGAC TACAACTTCA CCGCCTCGAT GGAGGACGAT
CTCGACGAGA TCGCCGGCGG CCGTGAGGGC CGGGTCGACT GGCTCACCCG GTTCTACTTC
GGCGACGCCG GTGACGCAGC CGCGGCGGCC GCCGATGGTC CGGGCCCCGA CAGCCCCGGC
CTGAAGAACC TCGTCGCCGC CAACCTCGAT GCGATCGACG CCCGCGAGAT CAACTCGATC
CCGCTCTACA CCGACACCGA CGGCAACGTC GTCTACGTAC GAGTCGGCCG CTACGGGCCG
TATCTCGAGC GCACCGTCGC ACCGAAGGAC GGCGAGACCG AGCCCCAGGT GCAGCGGGCC
AACATCCTCG CGTCGATGAC CCCGGACGAG CTGACCGAGG AGGTGGCGGA GAAGCTCTTC
GCGACCCCGC AGGACGGCCG CCCGCTCGGC GTGGACCCGG CCACGGGGCA CGAGATCGTC
GCCAAGGAAG GACGATTCGG TCCTTACGTC ACCGAGATCC TGCCGGAGCC CGAGACCGAC
GACGACACCG AGAATCTCGA CGAGGCGGCG GCGAAGCCCA AGCGCAAGAA GAAGACCGAC
GCGCCGAAGC CGCGCACCGG ATCACTGCTC AAGAGTATGG ATATCGAGAC GGTGACGCTC
GACGATGCGC TGCGGCTCCT GTCGCTGCCC CGCGTCGTGG GTGTCGACCC CGAGTCCAAG
GAAGAGATCA CCGCTCAGAA CGGCCGCTAC GGTCCGTACC TGAAGAAGGG CACCGACTCC
CGGTCGCTGG CCACCGAGGA ACAGATGTTC ACGGTGACCC TCGAGGAGGC GCTCAAGCTG
TACGCGGAGC CCAAGCGTCG GGGCCGCGGT GCGGCTGCCG CGCCGCCACT GCGCGAGTTG
GGCAACGACC CGGTTTCCGG GAACGCCATG GTGATCAAGG ACGGCCGGTT CGGCCCGTAC
GTCACCGATG GGGAGACCAA CGCCTCGCTC CGCAAGGGCG ACGAGGTCGC GTCGATCACC
GACGAGCGCG CTTCCGAGCT GCTCGCGGAC CGTCGAGCGC GCGGCCCGGT GAAGAAGAAG
GCCACCAAGA AGGCGCCCGC CAAGAAGGCG CCGGCGAAGA AGGCCGCCGC GAAGAAGGCG
GTCGCGAAGA AGACCACCGC CACGAAGACG GCCGCGAAGA AGGCACCGGC GAAGAAGGCG
GCCCCGGCCG CCGACGAGAC GGTCTAA
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| Protein sequence | MAARGKAADG DGLQRLVIVE SPAKGKKIGD FLGPNYTVRA SMGHIRDLPS RDNPLPEADQ
GKSWSRLGVD VDHDFEAHYV TSASKRSTVS ELKSLLKQAD ELYLATDGDR EGEAIAWHLQ
EVLKPKVPVK RMVFHEITQQ AIQAAAQEPR ELDMNLVDAQ ETRRILDRLY GYEVSPVLWR
KVNQGLSAGR VQSVATRIIV DRERERIAFR TAGYWDIAAQ LDAGAEASPR TFGARLVSVD
GDRVATGRDF DAQGQLKKPT GITVLDGTRA NALVAGLQGA NLAVTSVEEK PYTRKPYAPF
MTSTLQQEAS RKLRFNTDRT MQIAQRLYEG GYITYMRTDS TTLSETAIAA ARDQARQLYG
ADFVHPTPRQ YTRKVKNAQE AHEAIRPAGE TFQTPGALAS VLNSDEFRLY ELIWQRTVAS
QMADVKGTTL SLRIGGTASS GESVEFAASG RTITFPGFLS AYVETVDEQA GGEADDAESR
LPQLTKGQRV TAAELTAADH VTSPPARYTE ASLVKTLEEL GIGRPSTYAS IIKTIQDRGY
VVKKGNALVP QWVAFAVIGL LEGHFGGLVD YNFTASMEDD LDEIAGGREG RVDWLTRFYF
GDAGDAAAAA ADGPGPDSPG LKNLVAANLD AIDAREINSI PLYTDTDGNV VYVRVGRYGP
YLERTVAPKD GETEPQVQRA NILASMTPDE LTEEVAEKLF ATPQDGRPLG VDPATGHEIV
AKEGRFGPYV TEILPEPETD DDTENLDEAA AKPKRKKKTD APKPRTGSLL KSMDIETVTL
DDALRLLSLP RVVGVDPESK EEITAQNGRY GPYLKKGTDS RSLATEEQMF TVTLEEALKL
YAEPKRRGRG AAAAPPLREL GNDPVSGNAM VIKDGRFGPY VTDGETNASL RKGDEVASIT
DERASELLAD RRARGPVKKK ATKKAPAKKA PAKKAAAKKA VAKKTTATKT AAKKAPAKKA
APAADETV
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