Gene Tpau_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3846 
Symbol 
ID9158026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3969783 
End bp3971243 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content69% 
IMG OID 
Productfumarate reductase/succinate dehydrogenase flavoprotein domain protein 
Protein accessionYP_003648760 
Protein GI296141517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTC GCCGACGCCC GATCGCCGCC GAATCCGTGA CCGACTGGAA CCTGGAAGCC 
GATGTGGTGA TCGCCGGATA CGGCATCGCC GGGGTCTGCG CCGCGATCGA GGCCGCACGG
GCAGGGGCCG ATGTCCTCGT TCTCGAGCGG GCCGGCGGTT GGGGCGGAGC GGCCGCCGCC
TCGGGTGGCT GGATCTACTT GGGCGGCGGC ACCGCGTTGC AACGCTCGCT GGGCTTCGAC
GACAGCGCGG AGAATATGGA GACCTTCATG ACAGCGGCGC TCGGGCCCGG CGTCGACACC
GCCAAGATCC ACGACTACGC CCACGGCAGC ATCGACCACT ACGACTGGCT GGTTGACTGC
GGCGTGGTCT TCAAAGAGGA GTTCTGGGGC GAGCCCGGCT GGGAGGTCCC GCACGACGAA
GGCCTCGGGT ACTCCGGCGG CGAGAATTCC GCACCGTTCA ACACGATCGC CGCTCCTGCG
CCCCGCGGGC ATGTGCCGCA GATGGCGGAC AAGCAGACCG GCGTCCGCGG CGCCGGATAC
ATGTTGATGA AACCACTGGT GGACACCGCG GAAGACCTCG GTGTGCGCGC CGAGTACGAC
GTGCGAGCGC ACACGCTGGT CAGCGACGCC GCGGGGCGAG TGTGCGGGCT CGCCGCCCGG
CGGTTCGGCG AGGATCTCAC CATTCGGGCC CGACGGGGCG TCGTGCTCGC GACCGGGAGC
TTCGCCTACA ACGCGGAGAT GGTCGCGACC TATGCACCAC GGCTGATCGG GCGGCCCGCC
GCGGCGGTCG AGGAACACGA CGGTGCGGGA ATCCTCATGG CACAGGCCGC GGGCGCCGGG
GTGGCGCACA TGGACGCGAC CGAGGTGGCA TTCTTCGGCG ATCCGCAGAT GATGGCGCGC
GGAATCCTGA TCAACGGGCG CGGCCAGCGG TTCATCGCGG AGGACACGTA CGGCGGCCGG
ATCGGGCAGG CGGCACTGAT CCAGCAGGAC AACACGGTTT TCCTGGTGAT GGACATGCAG
TCGCACGAGG AGGCGTTGGC GACCGAGACG TCCACCCCGT ATTTCCGGCA GCCACCTACC
TGGGCGGCGG AGACGGTCGA CGAACTGGAA TCCGATATGG GCCTGCCCGC CGGCACTCTC
GCAGGCACCG TCGCCACCTA CAACCGGTAT GCCGCGGCCG GTACCGACCC GCTGCTGCAC
AAGAAGAAGC AGTGGGTGCG CCCGCTCACC GGGCCCGTGG CCGCGTGGGA CATGCGTGGA
TTCACCGCCG GATTCACCCT CGGCGGGTTG CACACCGATG TCGAATCGCG GGTGCTGCAC
GTGGACGGCG AGCCGATTCC CGGGTTGTTC GCCGCGGGCA GGTGCACCTC CGGGGTGTGT
GCGGGCGGCT ATGCCAGCGG CACGAGCCTC GGTGACGGAA GTTTCTTCGG CCGACGCGCA
GGCATCTCCG CCGCAACCTA A
 
Protein sequence
MSTRRRPIAA ESVTDWNLEA DVVIAGYGIA GVCAAIEAAR AGADVLVLER AGGWGGAAAA 
SGGWIYLGGG TALQRSLGFD DSAENMETFM TAALGPGVDT AKIHDYAHGS IDHYDWLVDC
GVVFKEEFWG EPGWEVPHDE GLGYSGGENS APFNTIAAPA PRGHVPQMAD KQTGVRGAGY
MLMKPLVDTA EDLGVRAEYD VRAHTLVSDA AGRVCGLAAR RFGEDLTIRA RRGVVLATGS
FAYNAEMVAT YAPRLIGRPA AAVEEHDGAG ILMAQAAGAG VAHMDATEVA FFGDPQMMAR
GILINGRGQR FIAEDTYGGR IGQAALIQQD NTVFLVMDMQ SHEEALATET STPYFRQPPT
WAAETVDELE SDMGLPAGTL AGTVATYNRY AAAGTDPLLH KKKQWVRPLT GPVAAWDMRG
FTAGFTLGGL HTDVESRVLH VDGEPIPGLF AAGRCTSGVC AGGYASGTSL GDGSFFGRRA
GISAAT