Gene Tpau_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3830 
Symbol 
ID9158010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3953710 
End bp3954399 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648744 
Protein GI296141501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.85696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTCGAA TCAAGATCGG TATGGCAGTT GCGGCGGTCG CGGCCTGCGC CGTCTCGGTG 
ATGTCCGTGG GGCCCGCCTC CGCTCAGATC ACCCCGCAGA ATCCGTCCGG CCCCGTCAAG 
GGCGGTAAGC AGACGATCAA GTCCGAGGGC GTGAATGCGC AGATCGCGCT GTTCGACCTC 
AAGGCGAGGC TGTTCCCGCC GCTGGCCGGT GACAACAAGT CGCGCCTGGC CTACGTGGAC 
GGCAAGGCTG AGGGCACCAT CACCAAGGCG CCCGGTGAGA TCGAGGCCGC CACCGTCGAG 
GTCGGCTACG TCGTCGCCTG CGGCGTCAAG GACGGCGGCT TCGAGTCCTG GATCGGCTCG 
AACCAGACGA TCGGCGCCGC GGGCGCGATC GCCGGCAGCA TCCCCGCCGC GGGTGCGGCG 
CTGGTCGGCG TCGGCGGTTC GCTGGGCCTG ACTCAGAACC AGGTCATCAA GACCGCGCCG 
GGCGGCATCG TGTATCTGCC CGTGGGTTCG AAGACGATCC AGAAGCCGAA GCCCGGCGAG 
AACTTCGGTG TCCGGTTCGG TGAGAAGCGC GTGAGCATCG AGGGCTGCAT CGGCAGCGTC 
GACGCCGTCG CCTACTCCAC CCTGACCGTC TCGTCGCGCG CCTTCGACGA TATGAAGACG 
GTCTACAGCG AGGTCATGCG CTTCGCGTGA
 
Protein sequence
MRRIKIGMAV AAVAACAVSV MSVGPASAQI TPQNPSGPVK GGKQTIKSEG VNAQIALFDL 
KARLFPPLAG DNKSRLAYVD GKAEGTITKA PGEIEAATVE VGYVVACGVK DGGFESWIGS 
NQTIGAAGAI AGSIPAAGAA LVGVGGSLGL TQNQVIKTAP GGIVYLPVGS KTIQKPKPGE 
NFGVRFGEKR VSIEGCIGSV DAVAYSTLTV SSRAFDDMKT VYSEVMRFA