Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3798 |
Symbol | |
ID | 9157978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3920537 |
End bp | 3921322 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | 2-oxopent-4-enoate hydratase |
Protein accession | YP_003648715 |
Protein GI | 296141472 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.138107 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGACT CCGCCGTCGC CGCCGCGGCC GACGCCCTGC TGGGCGCCTA CTCCGCCGGG GCGCCGATCG ACCCGATCAT CGGTACCTAC CCGGACGCCA CGATCACCGA CGCCTACCGG ATCCAACAGG AGCAGGTGCG TCGCTGGGAG GCTGCCGGCG ACCACGTCAA AGGCCACAAG GTGGGCCTCG CTTCACTCGC CATGCAGCGC CAGATGAACG TCTACGAACC CGACTTCGGC CATCTCACGG CCTCGATGTT CCACCTGGAG CATCTCCCGA TCGACGCATC CGGATGGCTG CAGCCGCGGA TCGAACCGGA GATCGGCTTC ATCCTGGGCC GCGAGTTGAC AGGTCCGGGC GTCACCGTCG CCGACGCGAT CCGCGCGATC GACTACGTGG TCCCGGCACT CGAGGTGGTC GATTCCCGGA TCCGCGACTG GAACATCTCC ATCGTCGACA CGGTCGCCGA CAACGCCTCG TCAGGCGGGG TGGTGCTGGG CAGCAAGCCC ACCAGAATCG ACGCCCTCGA CCTCATCGAC GTGGGCTGCA CGTTCTGGAT CGGGGGGCAA CAGGTCGGTA CCGGAACCGG TGGCGCCGTG CTCGGTTCGC CGATCAATGC CCTGGTGTGG CTCGCCAACA CGGTCGGCCC GCTGGGAACG ACGCTCGAAC CCGGGCACGT CGTCCTGCCC GGCTCCATGA CCAGGGCCGA ATCGGTCCGG CCGGGCGACA CGATCATCGC CGACATGGGG CCGCTGGGTT CCGTGACCGC GGTCCTGGCC CCCTGA
|
Protein sequence | MDDSAVAAAA DALLGAYSAG APIDPIIGTY PDATITDAYR IQQEQVRRWE AAGDHVKGHK VGLASLAMQR QMNVYEPDFG HLTASMFHLE HLPIDASGWL QPRIEPEIGF ILGRELTGPG VTVADAIRAI DYVVPALEVV DSRIRDWNIS IVDTVADNAS SGGVVLGSKP TRIDALDLID VGCTFWIGGQ QVGTGTGGAV LGSPINALVW LANTVGPLGT TLEPGHVVLP GSMTRAESVR PGDTIIADMG PLGSVTAVLA P
|
| |