Gene Tpau_3798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3798 
Symbol 
ID9157978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3920537 
End bp3921322 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID 
Product2-oxopent-4-enoate hydratase 
Protein accessionYP_003648715 
Protein GI296141472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.138107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACT CCGCCGTCGC CGCCGCGGCC GACGCCCTGC TGGGCGCCTA CTCCGCCGGG 
GCGCCGATCG ACCCGATCAT CGGTACCTAC CCGGACGCCA CGATCACCGA CGCCTACCGG
ATCCAACAGG AGCAGGTGCG TCGCTGGGAG GCTGCCGGCG ACCACGTCAA AGGCCACAAG
GTGGGCCTCG CTTCACTCGC CATGCAGCGC CAGATGAACG TCTACGAACC CGACTTCGGC
CATCTCACGG CCTCGATGTT CCACCTGGAG CATCTCCCGA TCGACGCATC CGGATGGCTG
CAGCCGCGGA TCGAACCGGA GATCGGCTTC ATCCTGGGCC GCGAGTTGAC AGGTCCGGGC
GTCACCGTCG CCGACGCGAT CCGCGCGATC GACTACGTGG TCCCGGCACT CGAGGTGGTC
GATTCCCGGA TCCGCGACTG GAACATCTCC ATCGTCGACA CGGTCGCCGA CAACGCCTCG
TCAGGCGGGG TGGTGCTGGG CAGCAAGCCC ACCAGAATCG ACGCCCTCGA CCTCATCGAC
GTGGGCTGCA CGTTCTGGAT CGGGGGGCAA CAGGTCGGTA CCGGAACCGG TGGCGCCGTG
CTCGGTTCGC CGATCAATGC CCTGGTGTGG CTCGCCAACA CGGTCGGCCC GCTGGGAACG
ACGCTCGAAC CCGGGCACGT CGTCCTGCCC GGCTCCATGA CCAGGGCCGA ATCGGTCCGG
CCGGGCGACA CGATCATCGC CGACATGGGG CCGCTGGGTT CCGTGACCGC GGTCCTGGCC
CCCTGA
 
Protein sequence
MDDSAVAAAA DALLGAYSAG APIDPIIGTY PDATITDAYR IQQEQVRRWE AAGDHVKGHK 
VGLASLAMQR QMNVYEPDFG HLTASMFHLE HLPIDASGWL QPRIEPEIGF ILGRELTGPG
VTVADAIRAI DYVVPALEVV DSRIRDWNIS IVDTVADNAS SGGVVLGSKP TRIDALDLID
VGCTFWIGGQ QVGTGTGGAV LGSPINALVW LANTVGPLGT TLEPGHVVLP GSMTRAESVR
PGDTIIADMG PLGSVTAVLA P