Gene Tpau_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3788 
Symbol 
ID9157968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3909679 
End bp3910305 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648705 
Protein GI296141462 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCCCG AAGGCACAAC CGCAGCCGCA CCGGTAGCTC CCGCCGCGCC CGCCCGCGAC 
GAACTGGATA CCGCGGGACA GCGGGAACGC CGCAAGCGGA TCATCGACGC CACGCTGGCA 
CTGGCTCGCA AGGGCGGCTA CGACGCGGTG CAGATGCGCG CCGTCGCCAA GAAGGCCGAC 
GTGGCTCTGG GCACCCTGTA CCGCTACTTC CCCTCCAAGG TGCACCTGTT GGTCGCGGGT 
CTGGTGAGCC AGTTCGAGCG GGCCGGCGAG CGGATCGGCA AGGCGACGGT GCCCGGTGAT 
ACCGCCGCCG AGCGGCTCAT GTTCGTTCTC GAACGCAACA CGCAAGCACT GCAACGCGCG 
CCACTGCTGA CCGAGGCCAT GGTGCGCGCC TTCATGTTCG CCGATGCCAC CGCCGCCGCC 
GAGGTCGAGC GCGTCGGCCG GTTGCTGGAG GGTATGTTCG CGCACGCCCT CGGAGTCGAG 
GACCCCACCG ACGAGCAGCG CGATACCTTC CACCTGATCG CCGATGTGTG GATGGCCAAT 
CTGGTCGCCT GGGTGACCCA TCGCGCCTCG GCTTCCGAAG TGCAGAAGCG GCTCGGCGTC 
GCGGTCAAAT TGCTGATAAA AGACTGA
 
Protein sequence
MPPEGTTAAA PVAPAAPARD ELDTAGQRER RKRIIDATLA LARKGGYDAV QMRAVAKKAD 
VALGTLYRYF PSKVHLLVAG LVSQFERAGE RIGKATVPGD TAAERLMFVL ERNTQALQRA 
PLLTEAMVRA FMFADATAAA EVERVGRLLE GMFAHALGVE DPTDEQRDTF HLIADVWMAN 
LVAWVTHRAS ASEVQKRLGV AVKLLIKD