Gene Tpau_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3779 
Symbol 
ID9157959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3901483 
End bp3902067 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content73% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648696 
Protein GI296141453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTGGC AGGCGGCGCG CGAGCGCGAC GCCGCGGATC GGATTCTCGC GTCTGCGGCC 
GAGTTGTTCG CACGGGACGG CGTGGCCGCG GTGGGGATGG CGGAGCTCGC GCAAGCCGCA 
GGCTGTTCCC GGGCCACGCT GTATCGCTAC TTTCCGAACC GGCAGGCACT GCACGCCGCA 
TTCATCCAGC GCGAAGCCCG AGCCGTGGCA GTCGCGGTCC GCGACCGGAC GTCCGGTATC 
GCCGATCCAG GCGAACGCCT GCTGCGGGCG CTGCAGATCG CCGTCGAGGA GGTCCGCGGG 
GCACCGCCGC TGGCCGCCTG GTTCGCGGTC GACGAGCCCC CGGCCGGCGG CATCGCGTCG 
CGATCGGCCG GCATCGAGGC GGTGGCTTTC GGCCTGCTCA CCGAGATCAC GGGCGCCGAC 
GCCCCGGAAT CTGCGCCCGC AGCGGCGCGC TGGCTGGTGC GCGTGGTGGT CTCACTGCTC 
TCGCACCCCG AACCCGATGC CAGCGCCGAG GAGGAGTTGC TGCGGCGGTT CGTGATCCCC 
GCTGTACTCA CCGATCCCGC GCTCGCCGCT ACGGTGAGGG GGTGA
 
Protein sequence
MNWQAARERD AADRILASAA ELFARDGVAA VGMAELAQAA GCSRATLYRY FPNRQALHAA 
FIQREARAVA VAVRDRTSGI ADPGERLLRA LQIAVEEVRG APPLAAWFAV DEPPAGGIAS 
RSAGIEAVAF GLLTEITGAD APESAPAAAR WLVRVVVSLL SHPEPDASAE EELLRRFVIP 
AVLTDPALAA TVRG