Gene Tpau_3775 details

Gene Information

• Locus tag: Tpau_3775
• ID: 9157955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3897250
• End bp: 3898047
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 70%
• Product: ABC transporter related protein
• Protein accession: YP_003648692
• Protein GI: 296141449

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGGCA TCGACGTCCG CGCGGTCACC GTCGTGCTCG ATGGCACCAC CATCATCGAC 
GGGGTCTCCG TGGTCGCCCG GCCCGGTGAG ATCACCGGGG TGATCGGTCC GAACGGCAGC 
GGCAAATCCA CGCTGCTGCG CACCGTCTAC CGACACCTCA AACCTGTGGC CGGCGGGGTG 
CTGATCGGTG ACGACGATCT GCGCGATCTC TCGCCCGCCG CCGCCGCCCG GCGGATCGCC 
GCGATGCCCC AGGAGCGCGG CTCCGATTTC GACGTGACGG TCCGCGATGT GGTCGCGCTC 
GGCCGGATCC CGCACCAGGG CGGGTTCGGC CGCGAGTCAG CCGTGGACCG CGATCGGATC 
ACGACGGCCC TCGCCGATGC CGAGCTCACC GCCCTGGCGC ACCGGAGCTT CGCGTCGCTG 
TCCGGCGGCG AGCGGCAACG GACGCTGCTC GCACGGTGTT TCGCCCAGGG CGGCGAGGTG 
CTGGTGCTCG ACGAGCCCAC CAACCATCTC GATCTCGCCC ATCAGGCGCA GTTGCTCACG 
CTGCTGAAAC GGCGATCGGC GACCACGCTG ATCACCGTGC ACGACCTCAA TACCGCTGCC 
GCGGTGTGTG ATCGACTGTT CGTACTGTCC GCAGGGCGGA TCGTCGCCGG CGGCACCCCG 
GCCGAGGTAC TGACCCGCGA CCTGCTCGAC GATGTCTTCT CCGTTCACGC CGAGGTGATC 
GAGCACCCCG TCACCGGCCG GTTGCTGGTG GCCGTGGACT ATCTCCGCGA CATGCCCGGC 
GGCAGCCCGC CGTCGTGA 

 

Protein sequence

MSGIDVRAVT VVLDGTTIID GVSVVARPGE ITGVIGPNGS GKSTLLRTVY RHLKPVAGGV 
LIGDDDLRDL SPAAAARRIA AMPQERGSDF DVTVRDVVAL GRIPHQGGFG RESAVDRDRI 
TTALADAELT ALAHRSFASL SGGERQRTLL ARCFAQGGEV LVLDEPTNHL DLAHQAQLLT 
LLKRRSATTL ITVHDLNTAA AVCDRLFVLS AGRIVAGGTP AEVLTRDLLD DVFSVHAEVI 
EHPVTGRLLV AVDYLRDMPG GSPPS