| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3767 |
|---|
| Symbol | |
|---|
| ID | 9157947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3887457 |
|---|
| End bp | 3888251 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, MerR family |
|---|
| Protein accession | YP_003648684 |
|---|
| Protein GI | 296141441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.237591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCGC GCGCCACGCT GCTGTCGGTC AAGCAATTGC GGCGGTACCA CGAACAGGGG
GTACTGGTGC CCGCCGCGGT GGACCCGGAT TCGGGCTACC GCCTCTACGA TGCGGCGCAG
GTCCACGACG CCGCCGTGCT CTCCCGGCTC CGTGATCTGG ATCTACCGCT CGCCGAGGTG
GCACGGGTCC TCGAGGCCCG TGATCCGGAG GTGACCCGCA CCGTGCTCGC CCAGCACGAG
CGAACCCTCC GTGAGCGCCG CGCCGATCTG GAACGCGCCA TCGTCGCCCT GCAGGACGCG
ACGGCGCCGC TGGTCCACAC GCCTACGCAC CTGCGCGAGT TCGAGGCGGT CGACGTCCTG
GAGATCCGCG GCACCGTGGA GCACACTCGG CTGCCCGAGT TCCTCGGCGC AGCCTACCCG
GAGCTCGAAA CCTGCGCCGC GGCGGCCGGA CTCACCGTGT CAGGGCCGTC GATGGCCGAG
TATCCGGCGC AGTTCTCCGA TGTGGAGGAG GTGTCGGCGC TGCTGCCGGT ATCCGGGCCC
GGTGCGGTCT CCGGACGGGT GCGTAACCGT CGGCTGGGCC GTGTGCACTG CGCGGTCGCC
GTGCACCACG GTGCCTACGA CACATTCGAC GAGACCTATG GCCAACTGGG CGCGTGGATC
GCTCGCAATG CCACCGACGC GCAAGCCCCC ATCATCGAGC GCTACCTCGT CGATCCCCTC
GCAGCTGCGA CCCCCGCGGA CCTGCGTACC GAGATCTGGT GGCCGGTCGT GGCCGCCGCA
CCGAAGGAGA ACTGA
|
|---|
| Protein sequence | MFSRATLLSV KQLRRYHEQG VLVPAAVDPD SGYRLYDAAQ VHDAAVLSRL RDLDLPLAEV
ARVLEARDPE VTRTVLAQHE RTLRERRADL ERAIVALQDA TAPLVHTPTH LREFEAVDVL
EIRGTVEHTR LPEFLGAAYP ELETCAAAAG LTVSGPSMAE YPAQFSDVEE VSALLPVSGP
GAVSGRVRNR RLGRVHCAVA VHHGAYDTFD ETYGQLGAWI ARNATDAQAP IIERYLVDPL
AAATPADLRT EIWWPVVAAA PKEN
|
|---|
| |