| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3759 |
|---|
| Symbol | |
|---|
| ID | 9157939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3877148 |
|---|
| End bp | 3878098 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_003648676 |
|---|
| Protein GI | 296141433 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.445069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGT CGCCGCGCGC CCTGGTCAGG GTCGTCGCCA TCGCCTTCGT CACACTACTC
GTCGCCGCGC TCACCGCGTG CGGCTCCAGT CCGGAGTCGG CCCCGGCGAG CTCCCAGCCG
GCCTCGGTGA AGCGGGTCGC CTCGCTCGGC TTGGGAGATG TGGACACTCT GCTCGCGCTC
GGTGTGGTGC CGGTGCTCGT GGCCCCCTGG GCCCAGGACG CCACCGAGCC GGTGGGGGAA
TGGTCGAAGC CGCTGTTGCA GGGCCAGACC CCGGCGATGG TGCTGGGTAC CGGCAACGCC
GTGGACGGTA AGGCGATCGA GACCATCGCT ACCGCCAAAC CCGATCTGAT CGTGGCCGTG
AACTCAGGCT TCGACGACGC CACCTTCGAG CGGCTCCAGT CGATCGCGCC GGTGATCCGG
CGCCCCGCGC AGTTCGCCGC GTGGGGCGTC CCGTGGGAGG CGCAGGTGCG TGCGATCGCG
GCGGGAGTGG GCCGCACCGC CGAGGGCGAT GCCCTCATCG CCAAGACCAA CGACCGGATC
GCCCAGGCGA AGGCCGATCA CCCCCGGTAT CAGGGGAAGA CGGCCGCCAC CGTACTGCCG
AAGTCCGACG GCGGCCTCTA CGCCTACGCG AACACCGACG GTCGCGGCCA GGTGCTCACC
ATGCTGGGAT TCAGCCTGCC CGAATCGGTT TCGCGACTGG TGCCGGCGGG GAAGTTCTAC
GCGGACGTCT CCGCCGAGAA CCTGAAGATC CTCGATCTGG ACACCCTGGT GTACTTGGAC
TACGGCACTA AGCAGAGCGA GGAGACGGCG TTCCGATCCC TGAAGGTGGT CGGCGAGAAC
CGGGTGGCGC GGATCGACCG TAACCTCGGC AACGCGATGT CGATGCCCAA TCCGGTGACC
CTGGAGTGGG TATTGAAGAC CCTCCCGCCG AAGCTGCCGG ACTTCGCGTG A
|
|---|
| Protein sequence | MISSPRALVR VVAIAFVTLL VAALTACGSS PESAPASSQP ASVKRVASLG LGDVDTLLAL
GVVPVLVAPW AQDATEPVGE WSKPLLQGQT PAMVLGTGNA VDGKAIETIA TAKPDLIVAV
NSGFDDATFE RLQSIAPVIR RPAQFAAWGV PWEAQVRAIA AGVGRTAEGD ALIAKTNDRI
AQAKADHPRY QGKTAATVLP KSDGGLYAYA NTDGRGQVLT MLGFSLPESV SRLVPAGKFY
ADVSAENLKI LDLDTLVYLD YGTKQSEETA FRSLKVVGEN RVARIDRNLG NAMSMPNPVT
LEWVLKTLPP KLPDFA
|
|---|
| |