Gene Tpau_3742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3742 
Symbol 
ID9157922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3859887 
End bp3860825 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003648659 
Protein GI296141416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAAG TCTCGGGGCT CACGAAAACG TACGGGGCCG TGCAAGCGGT CAACGACCTG 
TCGTTCGCGG TGCGGCCCGG CCGGGTGACC GGATTCCTCG GCCCGAACGG TGCGGGCAAG
TCGACGACGA TGCGGTGCAT CCTCGGCCTC GATCGTCCGA CTGCGGGCAC GGCGACCATC
GACGGCCGCG ACTACGCCGC CATCGACCGA CCGCTCACCC AGGTGGGCGC ACTGCTCGAT
GCGAAATGGG TGCACCCCAA TCGCACCGCG CGCAATCACC TGCGGTGGAT GGCCGCCGCA
AGCGGGCTCC CGGCGAGTCG TGCCGACGAG TGTCTGGCGA TGGTGGGCCT GTCCGATGTG
GCCGATAAGA AGGCCGGCGG CTTCTCCCTC GGCATGTCGC AGCGACTCGG CATCGCCGGT
GCGCTGCTCG GAGATCCGCC GGTACTCATG TTCGACGAGC CGGTGAACGG TCTCGACCCC
GAGGGCATCG TGTGGGTGCG CACGTTCATG AAATCGCTGG CGGCGCAGGG ACGCACAGTG
TTCGTCTCCA GTCACCTACT GGCCGAGATG GCCCTTACCG CTGATGATGT GGTGATCGTG
GGACGCGGCC ACCTGGTGTG GAACGGCACC ATGGCCGACT TCATCGCGCA GAACTCGGAA
CACGCGGTGC GCGTGCGCAG TCCGCGGGAG AAGGAACTCG CCGAGGCGCT CACCGCCCGC
GGCCTGAACG TGGCGGTCGC GGCGGAACCG GCGCCCGGAG GTGGTGGCCG CACCGTGCTC
ACCGTGCAGG GAGCGACCAG TGACGCGGTC GGAGAGATCG CGGCCGCCGC GGGACTGCCG
CTCAGTGAAC TCGCGCCGCA GACGAGTTCG CTGGAGCAGG TTTTCATGCA GCTCACCGGT
GGTGCCGTGG AGTACCGGGG CCTGGGAGGT GCCGCATGA
 
Protein sequence
MIEVSGLTKT YGAVQAVNDL SFAVRPGRVT GFLGPNGAGK STTMRCILGL DRPTAGTATI 
DGRDYAAIDR PLTQVGALLD AKWVHPNRTA RNHLRWMAAA SGLPASRADE CLAMVGLSDV
ADKKAGGFSL GMSQRLGIAG ALLGDPPVLM FDEPVNGLDP EGIVWVRTFM KSLAAQGRTV
FVSSHLLAEM ALTADDVVIV GRGHLVWNGT MADFIAQNSE HAVRVRSPRE KELAEALTAR
GLNVAVAAEP APGGGGRTVL TVQGATSDAV GEIAAAAGLP LSELAPQTSS LEQVFMQLTG
GAVEYRGLGG AA