Gene Tpau_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3725 
Symbol 
ID9157905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3845069 
End bp3845818 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003648642 
Protein GI296141399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATCG ACATCGACGG CGTGACGGTC GCACTGGGCG GTCGGACGGT GCTCAACCGC 
GTCCGGCTCG AGGTGGAACC CGGTGCGCAC GTGGGACTCA TCGGTCCCAA CGGCAGCGGA 
AAATCGACAC TGCTGCGCTG CCTCTACCGC GCGCTGACTC CCGACGCGGG GACCGTGCGC 
ATCGGTGGCC GCGACCTTGC GACGGTCCAC CGGCGCGAGG GTGCGCGCCT CGTCGCGGCC 
GTCACCCAGA GCGAAACCGG GCACCTCGGG TTCACCGCCG CGGAGACCGT CCTGCTAGGG 
CGATTCCCGC ACGGCGACGC GGGTACGCCG GGGGCGCGCC GGGCGGTCGC CGCGGCGATG 
GAATCGACCG GCACCGGCCA TCTGCGCGCG CGCAGTGTGC TCGACCTGTC CGGCGGCGAA 
CGCCAGCGCG TCCTGATCGC GCGGGCGCTC GCGCAGGACA CCCCGGTGCT GCTGCTCGAC 
GAGCCGCTCA ATCATCTCGA CGTGCGGCAT CAGATCGACC TACTGAGGTA CGTGCGCCGC 
ACCGACAAGA CGACCGTCAT GGCCATCCAC GACATCGACC TGGCCGCCCA GAGCTGTGAT 
CAGCTCGTGC TGCTCGATCG CGGCTCCGTG GTCGCGGCGG GTTCCCCGGC ATCCGTGCTC 
GACCCGGAAC GACTCTTCGC CGTCTACGGC ATCCGACCCA CCATCGTGCC CACCGCCGAG 
GGGCGGCCGC GCGTGAGCTT CGAGCTCTGA
 
Protein sequence
MRIDIDGVTV ALGGRTVLNR VRLEVEPGAH VGLIGPNGSG KSTLLRCLYR ALTPDAGTVR 
IGGRDLATVH RREGARLVAA VTQSETGHLG FTAAETVLLG RFPHGDAGTP GARRAVAAAM 
ESTGTGHLRA RSVLDLSGGE RQRVLIARAL AQDTPVLLLD EPLNHLDVRH QIDLLRYVRR 
TDKTTVMAIH DIDLAAQSCD QLVLLDRGSV VAAGSPASVL DPERLFAVYG IRPTIVPTAE 
GRPRVSFEL