Gene Tpau_3717 details

Gene Information

• Locus tag: Tpau_3717
• ID: 9157897
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3838822
• End bp: 3839523
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 67%
• Product: cation antiporter
• Protein accession: YP_003648634
• Protein GI: 296141391

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAGC GGTTGGTGAA TCGGATCCTG CCCGACCTGC ACGACGGCCG GGCCGTCCTC 
GCGAAACTCG CACAGCTGGT GTGGCTGGAC GCGGTGTGGG TGATGTTGTG GGGCCGGATC 
ACGCCCGGCA ACATCGCGGC CGGCCTCCTG GTGGGTGCAG CGATCCTGCT GCTCCTACCG 
TTGCCGCCGG TGCCGGTGGA GGGCCGCGTG CACATCGGCT CGCTGCTCAA GCTGGTGATC 
GTCTTCGTGG GCGACATGAT CAAGTCGTCG GTGCAGGTGG CGTGGCTCGC GCTGCGGCCG 
GGACCGCCGC CGATGAGCGC CGTGCTGCGC GCGAAGGTGG AGGTCAAGTC CGATCTGGTG 
CTCACACTCC TGGTCGACAT GATGAACCTG ATCCCGGGCA CGATGGTGCT CGACATCGAC 
ACCAAGCGCC GACTGTTGTA CGTGCACGTG GTGGATGTCA GCAGTGAGAA GGCGGTGCGG 
CAGTTCTACC GCAGCACGGC GCGGCTGGAG CGGCTGTGCA TCAGCGCCTT CGAGCGTGAC 
AACGAGTGGC ACGCGAGCCC GATGCACGGT GTGGACGACG AGGAGTACCA CCGCGTCTCG 
CTCGCCGAGC GGACCCGGCT CGACGCCCGT GCGATGGCGC AGCCGGAGAT CGACTACCGC 
CGGAAGAAGG AGAACGGCGC GACCCAGGAG GGGCAGTCAT GA 

 

Protein sequence

MAKRLVNRIL PDLHDGRAVL AKLAQLVWLD AVWVMLWGRI TPGNIAAGLL VGAAILLLLP 
LPPVPVEGRV HIGSLLKLVI VFVGDMIKSS VQVAWLALRP GPPPMSAVLR AKVEVKSDLV 
LTLLVDMMNL IPGTMVLDID TKRRLLYVHV VDVSSEKAVR QFYRSTARLE RLCISAFERD 
NEWHASPMHG VDDEEYHRVS LAERTRLDAR AMAQPEIDYR RKKENGATQE GQS