Gene Tpau_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3709 
Symbol 
ID9157889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3828201 
End bp3828923 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content74% 
IMG OID 
Productphosphatidylserine decarboxylase related protein 
Protein accessionYP_003648626 
Protein GI296141383 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0242942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCGTC GCCCCCAGAC GCCGGTCGAC GGCCAGCTCA CCGAGCACTC CACCGGGCTG 
GGCCACGTCA CCGAGCTGAT CCGTCATACC GTCCCACCCC TGCACCCCGC GGGCACCCCG 
TTCATCGCGG GGTCGCTCGC GGTGGCGGCG GTGGGCTACC GGAAGGGCTG GATCCGCGTC 
CCCGCACTGC TCACGGCCGC CGCGTGCGCC GGATTCTTCC GGCACCCGCC GCGCGTGCCT 
CCGACCGCCG AGGGCGTCGC CGTGGCACCC GCCGACGGCG AGGTAACGCT GGTCGACACG 
CACGTGCCGC CCGCCGAGCT CGACCTCGGC GACCAACCGC TGCCGCGCGT GTCGATCTTC 
CTCTCGGTGT TCGACGCGCA CGTTCAGCGC GCACCGCTCG CCGGTGTCGT CGATGCCGTC 
GTGCACACTC CCGGCGCCTT CCTCTCCGCC GACCTCCCCG AGGCCAGCGA CGCCAACGAG 
CGCACCACGG TCCGGCTCGC CACCGAGCAC GGCCCCGTCG GCGTCGTGCA GATCGCGGGT 
CTGGTGGCGC GCCGCATCCG CACCGACTGC GCCGTCGGCG ACCAACTCGA GCGCGGCGAG 
ACCTACGGCA TCATCCGGTT CGGCTCGCGG GTCGACACCT ACTTCCCGGC GGGCACCGAG 
CTCACCGCCT ACAGCGGTCA GCGCGCGGTG GCCGCGGAGA CCGTGATCGC GCACCTGCCG 
TGA
 
Protein sequence
MARRPQTPVD GQLTEHSTGL GHVTELIRHT VPPLHPAGTP FIAGSLAVAA VGYRKGWIRV 
PALLTAAACA GFFRHPPRVP PTAEGVAVAP ADGEVTLVDT HVPPAELDLG DQPLPRVSIF 
LSVFDAHVQR APLAGVVDAV VHTPGAFLSA DLPEASDANE RTTVRLATEH GPVGVVQIAG 
LVARRIRTDC AVGDQLERGE TYGIIRFGSR VDTYFPAGTE LTAYSGQRAV AAETVIAHLP