| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3688 |
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| Symbol | |
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| ID | 9157868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3798877 |
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| End bp | 3800706 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003648605 |
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| Protein GI | 296141362 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.378004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGA CGGACTCCCG GCAGCATCTG ACAGTGGCGA GCACCCGCCA GGTGCGGGCC
GTCGTCGGTG CGGCCGCGCG GCCGCACCGC GCCCGGATCG TCGCCGCATT CGTGCTCCTC
GTCGGCGGGG CCGGTGCGGC ACTCGTGACG CCGCGGTTGA TGGGCTCGAT CGTGGACCTG
GCGCAGTCGG GGACCGCGGT GTTCGGGCAG ACCGGCACGG CCGCCGTCTG GCTGGCGGGA
GCCGCGATGC TCATCGCCAC GGTGCTGTCG GCGCTGCTCA CCGCCATCGG TTTCGTGCTC
ATGGCGGGCG CGGTCGACCG GGTGATCGCG CGCCTGCGCG AGCGCGTGAT CGACAGTGGC
GTGCACCTGC CGCTCGGGCG TCTGGAGAAG GTGGGGCCGG GCGATCTGAT CGCCCGCACC
ACCGACGACG TCACGGTGCT GACGCAGACC GTCAACGAGA CCCTGCCGTC GATCACCGGC
GCGGGATTCG CGGTCGCGGT GACGCTCGTG GGAATGGCCG CGCTCGACTG GCGGTTCTCT
CTCATCGTCT TCGCGCTGGC GCCCGTCTAC TACTTCGCCC TGCGCCGCTA CCGCCGGCAG
GCGCCGGAGA AGTACCTCGA GGAGCGCCGG CGGCGCGGCC GCCGGGCCGC CGAACTGCTG
GCCTCGATCC GGGGGCTGCC GACGGTCCGG GCCTTCGGCC TGCAGAACGA GCGGCGCGCC
CTCATCAGTG AGCACTCCTG GGCGGTGGTA CGGCTCGCCG TCGTCATCCG GGTGATCAAC
AACCGGCTCT TCGGGCGCGT CAACTTCGCC GAATGGCTGG GGATGGCGCT GCTCCTGGGC
ATCGGTTTCC AGTTGGTGCG CATCGGGGAT GTCACGGTCG GTATGGTGAC CGCCGCGACA
CTGTACTTCC TCCGGCTGTT CGGGCCCATC GGCCAGCTCA TGCTGGTGGT CGACCCCATC
TCGTCAGCGA CGGCGTCGCT GCAGCGTGTG GTCGGCGTGA TCGTCGAGGC GGACGAGCTC
ACTGACGGAC CCGTCGCGGC ACCGGTGGAG CGAGCCCGCG GCGATCTGCG TGCCGAGCGC
ATCCGGTTCT CCTACGGCGG CCGCGACGTG CTGCACGATG TGGATCTCGA TGTGGCCGCG
GGGAGTACGG TGGCCGTGGT CGGCGCATCC GGCGCGGGCA AGTCGACGCT CGCGGCGATC
CTCGCCGGTG CCCGACCCGC GGGTAGCGGC ACCGTCCGGC TCGACGGCGC CGACACCGCG
GGACTCGACC CCGCGCAGCG CGCCCGGCAG ATCTGCCTGG TGACGCAGGA CGTGCACGTC
TTCGCCGGAC CGCTCCGCGA CGATCTGCTG CTCGCGCGGC CCGAGGCCGG CGACGACGAG
CTTCTTGCCG CCCTGGACAT GGCCGGCGCA CGCACCTGGG CCGAAGAACT CGAGGGTGCG
GGCCGCACCG GTCTCGACGT CGTCGTCGGT GCGCAGGGCG TCGCACTGAC CCCGGTGCAG
GCGCAGCAGG TTGCGCTCGC CCGCGTGGCC CTGCTCGACC CGCCGGTGGT GATCCTCGAC
GAGGCCACCG CCGAGGCGGG GTCGGCCGGT GCGGCCGAAC TGGAGGACGC CGCGGAGCGG
ATCACCCAGG GGCGCACTGC TGTCGTGATC GCGCACCGGC TGGCGCAGGC CGCCCGCGCC
GATGAGGTGG TGCTCATGAG CGGCGGCCGG ATCAGTGAGC GCGGCCCGCA CAGCGAGCTC
GCCGCGGCCG GCGGCGCGTA CGCCGAGCTA TGGGCCGCAT GGTCCCGTGG CCGGGCCGAC
GCCGATACAC CCGATGAGGA GCTGACATGA
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| Protein sequence | MTTTDSRQHL TVASTRQVRA VVGAAARPHR ARIVAAFVLL VGGAGAALVT PRLMGSIVDL
AQSGTAVFGQ TGTAAVWLAG AAMLIATVLS ALLTAIGFVL MAGAVDRVIA RLRERVIDSG
VHLPLGRLEK VGPGDLIART TDDVTVLTQT VNETLPSITG AGFAVAVTLV GMAALDWRFS
LIVFALAPVY YFALRRYRRQ APEKYLEERR RRGRRAAELL ASIRGLPTVR AFGLQNERRA
LISEHSWAVV RLAVVIRVIN NRLFGRVNFA EWLGMALLLG IGFQLVRIGD VTVGMVTAAT
LYFLRLFGPI GQLMLVVDPI SSATASLQRV VGVIVEADEL TDGPVAAPVE RARGDLRAER
IRFSYGGRDV LHDVDLDVAA GSTVAVVGAS GAGKSTLAAI LAGARPAGSG TVRLDGADTA
GLDPAQRARQ ICLVTQDVHV FAGPLRDDLL LARPEAGDDE LLAALDMAGA RTWAEELEGA
GRTGLDVVVG AQGVALTPVQ AQQVALARVA LLDPPVVILD EATAEAGSAG AAELEDAAER
ITQGRTAVVI AHRLAQAARA DEVVLMSGGR ISERGPHSEL AAAGGAYAEL WAAWSRGRAD
ADTPDEELT
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