Gene Tpau_3682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3682 
Symbol 
ID9157862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3793182 
End bp3793829 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648599 
Protein GI296141356 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.7622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACCA CCACCGGATC CCGCCGCCGC GCCGAGCACC TCGGCCCGGA GCGCCGCCGT 
CCCCAGGTGC TGGACGCCGC GCTGGAGATC GCCGCCCGCG ACGGCCTCGC CGCGGTGACC 
ATCGGCACCG TCGCCGATCG ACTGCAGGTG ACCCGGCCGG TGATCTACTC CTGTTTCCCG 
GACCGGGTCG CGCTCATCAC CGAGCTGCTC GACCGCGAGA CCGAGAAGAT GATGGCCTAT 
GTGCTCACCT CGCTGCACAA CGCGCACGGC GAAGACCCGG AGCGGGCCTT CATCATCGGC 
GTGCAAGGCC TGTTGGCGGC CGTGAACGAG CGCGCCGACA CCTGGCAGTT GCTGTTCTCC 
GGGATCACCG ATCCCGAGGT GGTGCACCGC GTGCAGGGCG CGCGGGCCAC GCTCGCGAAA 
CAGGCCGAGG ATTGGATCCG CCCGGCCCTG ATCCGCTGGT GGGACATGCA GGATCTGGAC 
CAGAAGCTGC CGATGCTGAT GGAGCTGTTC GTCTCCGCGT GCGAAGCGGC GGTGCGCACC 
ATGCTGGCGG ACCGTCCCGA CGACGCCGGG CCGCAGTGGC GCGGCGATTC GGACCGGATC 
GGTGAGTTCT ACGGCTCCGC GATCTACCGC GCCTTCCACG GCGCGTGA
 
Protein sequence
MSTTTGSRRR AEHLGPERRR PQVLDAALEI AARDGLAAVT IGTVADRLQV TRPVIYSCFP 
DRVALITELL DRETEKMMAY VLTSLHNAHG EDPERAFIIG VQGLLAAVNE RADTWQLLFS 
GITDPEVVHR VQGARATLAK QAEDWIRPAL IRWWDMQDLD QKLPMLMELF VSACEAAVRT 
MLADRPDDAG PQWRGDSDRI GEFYGSAIYR AFHGA