| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3679 |
|---|
| Symbol | |
|---|
| ID | 9157859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3790405 |
|---|
| End bp | 3791244 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003648596 |
|---|
| Protein GI | 296141353 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.2542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCGC CGGCCCGGCG GCCCACGGTC GCCACGCTCA CGTACCGGGA CGGCGCCACG
AATCCCGTCC GGATCTTCCG GGGGCCGGAT CCGGCGGCGC CGTGCCTGAT GATCTGGCCG
GGGGTGAACG TGCCGGCCGG ATACTTCGAC GATCTGGGTC GGGCGCTGGT CGATGCCGGC
TACAACGCGG TGGTCTCCGA GTTACGCGGG CAAGGTGATT CGCGTCCTCG TGGTGCCACC
GGTGCGCACG GCTTCCAGGA TGTGGTGGTC GAGGACTACC CGGCGGTGTC CGCGTTGGTC
AAACAGAAGT TTCCGGATGC CAAGCGAATC CTGCTGGGGC ACAGCCTTGG CGGCCTGATG
GGCACGATGT ACGCGGCCCG CGCTCGGCGC AATCTGGCCG GGGTCATCCT GATCGCCTGC
GGTACGGGAT ATTACAAACT CGACGGACTG TCCGGAGCGG CGCGCCGGAT CGGCACCTCG
GTGGCGGCGC GCGCGGCGGC CCGGCGGGGG CACTGGTCGG GCCCCGACGG TCTGGGGGAG
GTGCCCAAGG GCATCGTCCG CGATTTCGAC CACCTGGTGC AGACCGGAGA CTTCAATGTG
GACGGCGCCG ACGTGGACTA CGAGGCCCGG CTGGCCGGAA CCCGCACGCC GGTACTCACC
CTGGCCGTCG CCGGTGACGA ACTGGTCAGC GACCGGCAGT CGCGGTACGT CGGGGAGAAG
TTCCCCGCCG AATCGGTGAC GCACGAGCGT ATTCCGGACC GGCTCGGCCA CAATCAATGG
ATCGTCGAGC CCGATAAGGT GGTTCCCGTT CTCGACCGCT GGATCCGCGC CCTCGCCTAG
|
|---|
| Protein sequence | MTSPARRPTV ATLTYRDGAT NPVRIFRGPD PAAPCLMIWP GVNVPAGYFD DLGRALVDAG
YNAVVSELRG QGDSRPRGAT GAHGFQDVVV EDYPAVSALV KQKFPDAKRI LLGHSLGGLM
GTMYAARARR NLAGVILIAC GTGYYKLDGL SGAARRIGTS VAARAAARRG HWSGPDGLGE
VPKGIVRDFD HLVQTGDFNV DGADVDYEAR LAGTRTPVLT LAVAGDELVS DRQSRYVGEK
FPAESVTHER IPDRLGHNQW IVEPDKVVPV LDRWIRALA
|
|---|
| |