| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3674 |
|---|
| Symbol | |
|---|
| ID | 9157854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3785374 |
|---|
| End bp | 3786756 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_003648591 |
|---|
| Protein GI | 296141348 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.151121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGATC ACTTTGACAC TGTTGTTCTC GGCGCCGGCC CAGGAGGCTA CGTCGCCGCA
ATCCGCGCAG CCCAACTCGG GCAGAAGGTC GCGGTCATCG AGGAGAAGTA CTGGGGCGGT
GTGTGCCTGA ACGTGGGCTG CATCCCGTCG AAGGCGCTTC TGAAGAACGC CGAGCTGGCG
CATACCTTCA CGCATAAGGC GCAGCTGTTC GGCATCTCCG GCGATGTCTC GTTCGACTTC
GGGGCGGCGT TCGACCGCAG CCGCAAGGTG TCGGAGGGGA TCGTCAAGGG CGTTCACTTC
CTGATGAAGA AGAACAAGAT CACCGAGATC AACGGCTACG GCACCTTCGT CGACGCCAAG
ACCATCCAGG TCGGCGATCA GACGGTGACG GGCGACAACA TCATCATCGA CACCGGTTCG
ACGGTGCGCC TGCTCCCGGG CGTCACACTC TCGGACAACG TGGTCACCTA CGAGGAGCAG
ATCCTCACCC GCGACCTGCC CGAGTCGATC GCCATCGTGG GCGCCGGCGC CATCGGCATG
GAGTTCGCGT ACGTGCTGAA GAACTACGGC GTGGACGTCA CCATCATCGA GTTCCTCGAT
CGCGCGCTGC CCAACGAGGA CGCCGATGTC TCCAAGGAGA TCGCCAAGCA GTACAAGAAG
CTGGGCGTGA ACATCCTCAC CTCCACCAAG GTCGAGTCGG TCGACGACCA GGGCTCGCAG
GTGGTCGTGA AGTACACCGG TCCCAAGGGG CCGGGCGAGA TCACCGTCTC CAAGGTGCTC
ATGTCGATCG GCTTCGCGCC GCGCGTCGAG GGCTTCGGCC TGGAGAAGAC GGGCGTGGCG
CTGACCGAGC GCGGCGCCAT CGCCATCGAC GACTACATGC GCACCAATGT GCCCGGCGTG
TACGCGATCG GCGACGTCAC CGCCAAGCTG CAGCTGGCGC ACGTCGCCGA GGCGCAGGGC
GTCGTGGCGG CGGAGACCAT CGCCGGCGCG GAGACCCAAA CCCTGGGCGA CTACCGCATG
ATGCCGCGCG CCACCTTCTG CCAGCCGCAG GTCGCCTCGT TCGGCCTCAC CGAGCAGCAG
GCCAAGGACG AGGGCTACGA CGTCAAGACC GCGACGTTCC CGTACTCGGC GAACGGCAAG
GCGCAGGGCC TCGGCGACGC CGTCGGCTTC GTGAAGCTGG TCTCCGACGC CAAGTACGGC
GAGCTGCTCG GCGGTCACCT CATCGGCCCC GACGTCTCCG AGCTGCTGCC CGAGCTGACC
CTCGCGCAGA AGTGGGACCT CACCGTCAAC GAGCTGGCCC GCAACGTGCA CACGCACCCG
ACGCTGTCGG AGGCGCTGCA GGAGTCGATC CACGGCCTCG CCGGCCACAT GATCAACCTC
TAG
|
|---|
| Protein sequence | MADHFDTVVL GAGPGGYVAA IRAAQLGQKV AVIEEKYWGG VCLNVGCIPS KALLKNAELA
HTFTHKAQLF GISGDVSFDF GAAFDRSRKV SEGIVKGVHF LMKKNKITEI NGYGTFVDAK
TIQVGDQTVT GDNIIIDTGS TVRLLPGVTL SDNVVTYEEQ ILTRDLPESI AIVGAGAIGM
EFAYVLKNYG VDVTIIEFLD RALPNEDADV SKEIAKQYKK LGVNILTSTK VESVDDQGSQ
VVVKYTGPKG PGEITVSKVL MSIGFAPRVE GFGLEKTGVA LTERGAIAID DYMRTNVPGV
YAIGDVTAKL QLAHVAEAQG VVAAETIAGA ETQTLGDYRM MPRATFCQPQ VASFGLTEQQ
AKDEGYDVKT ATFPYSANGK AQGLGDAVGF VKLVSDAKYG ELLGGHLIGP DVSELLPELT
LAQKWDLTVN ELARNVHTHP TLSEALQESI HGLAGHMINL
|
|---|
| |