| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3672 |
|---|
| Symbol | |
|---|
| ID | 9157852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3783472 |
|---|
| End bp | 3784347 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | ectoine hydroxylase |
|---|
| Protein accession | YP_003648589 |
|---|
| Protein GI | 296141346 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.138107 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTT CTGCGACATT GACCGACCGC TACCCCACGC GGCTGCCCGA GGCCGGCGCC
GTCATGGATC GGCCCGACCC GGTGGTCTGG CCCGGACGCG ACGGGCCGTG GGACGACGAG
GCCGTGAACT TCTTCGGCGA CAACGGTTAC CGCACCGTGG AGGATGTGCT CGACACTCCG
GACCTCGCGC AGGTGCGATC CGAGATCGAC CGCCTGGCCA CCGAACTCGG TGACGACGAA
CGCCTGATCC GGGAGAGCTC CAACGGTGAT GTGCGCTCGA TCTTCTCCGT GCACACGCTG
AGCACCGAGA TCGCGCGGAT CATCGCGCGC GACGACGTGG CCGGAGTCGC CCGGCAACTC
CTCGGCGACG ATGTCTACGT GCACCAGAGC CGGGTGAACC TCAAACCCGG CTTCGCGGGA
GGACCGTTTT ACTGGCACAG CGATTTCGAG ACCTGGCACG CCGAGGACGG CATGCCCACC
CCGCGGGCGG TGAGCGTCTC ACTGGCGCTC ACTCCGAACA CCCGGTTCAA CGGGCCGCTG
ATGATCCTGC CCGGCTCACA CCGCCGGTTC GTGCCCTGTG TGGGCGAGAC ACCGGGCGAC
TACCACCGCG AATCGCTCAA GTCCTACCGG CCGCCCTTCG GTACCCCGGA GGAGAGCGAT
ATCGCCGCGA TGGCGCAGCA GTACGGCATC ACCCAGGTGA CCGGCGGCGC GGGCAGTGCC
CTGTACTTCG ACTGCAACTG CCTGCACGCC TCCGCCGGAA ACATCTCGCC CTTCCCGCGG
TCGAACCTGT TCGTGGTGTT CAATGCGGTG TCCAATGCGC TGGAGGAGCC GTTCGCCGCG
CGGTCGCGGC GACCGGACTA CCTGGCCGCG CGGTAG
|
|---|
| Protein sequence | MNSSATLTDR YPTRLPEAGA VMDRPDPVVW PGRDGPWDDE AVNFFGDNGY RTVEDVLDTP
DLAQVRSEID RLATELGDDE RLIRESSNGD VRSIFSVHTL STEIARIIAR DDVAGVARQL
LGDDVYVHQS RVNLKPGFAG GPFYWHSDFE TWHAEDGMPT PRAVSVSLAL TPNTRFNGPL
MILPGSHRRF VPCVGETPGD YHRESLKSYR PPFGTPEESD IAAMAQQYGI TQVTGGAGSA
LYFDCNCLHA SAGNISPFPR SNLFVVFNAV SNALEEPFAA RSRRPDYLAA R
|
|---|
| |