Gene Tpau_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3642 
Symbol 
ID9157822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3755633 
End bp3757087 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content67% 
IMG OID 
ProductAlpha,alpha-trehalose-phosphate synthase (UDP- forming) 
Protein accessionYP_003648559 
Protein GI296141316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGCCG CTGAGATCTC CCCCGAAGGT GCCGAGTTCA TCGTGGTGGC CAACCGGCTC 
CCCGTCGACG TGGAACGGGC GCCCGACGGC ACCCTGACCT GGAAAGAGGC CCCCGGTGGC
CTGGTGACCG CGCTCAAGCC CATCCTCAGC GCCCGTAACG GCGCCTGGGT GGGCTGGCCC
GGTTCGCCCG ATGTCGGCGG CGAGCCCATC GAGGGCGAGG ACATGCTCCT GGTCCCGGTC
AAGCTCAGCG CACAGGAGGT CGAGGAGCAC TACGAGGGCT TCTCCAACGG CAGCCTGTGG
CCGCTCTACC ACGACGTGAT CGTCAAACCC GAGTACCACC GCGAATGGTG GAACACCTAC
GTCGAGGTCA ACCGCAGGTT CGCGGAGGAG ACCGCCAAGG TCGCCGCGAA GGGCGCCACC
GTCTGGGTTC AGGACTATCA ACTGCAGCTC GTCCCGAAGA TGCTGCGGAT GCTGCGCCCC
GACGTGAAGA TCGGGTTCTT CCTGCACATC CCGTTCCCGC CCGTCGAACT GTTCATGCAG
ATGCCGTGGC GGCGCGAGAT CATCGAGGGC ATCCTCGGCG CCGATCTGGT GGGATTCCAC
CTCCCCGGCG GCGCGCAGAA CTTCCTCTAC CTCGCCAACC GCCTGGCCGG CTACCCCACC
AGTAAGAACA CCATCGGCGT GCGCTCGAAG TTCGGCGTGG TCACGGTCGG CTTCCGCTCC
GTGCGCGTCG GCGCCTTCCC GATCTCCATC GACTCCGCCG AACTGGCCGC CACCTCGAAG
CTGCCGGAGA CCCGCAAACG GTCCCGGGGG CTGCGCAAGG AACTCGGCAA TCCCGAGAAG
ATCATGCTCG GTGTCGACCG GCTCGACTAC ACCAAGGGCA TCGACGTGCG GCTGCGCGCG
ATCGGTGAGC TCTACCGGGA GGGCCGCCTC GATCCGGAAC GCCACGTTTT CGTGCAGTTG
GCCACCCCGT CGCGCGAGCG GGTCGAGTCC TATAAGGCGA TGCGCAACGA CATCGAGCGG
CAGGTGGGCC GCATCAACGG CGACTTCGGG CGCGTCGGGC ACCCGGTGGT GCACTACATC
CACAAGCCGG TGCCGCGGAA TGAGCTGGTC GCCTTCTTCG GCGCTGCCGA CGTGATGCTG
GTGACACCGC TGCGTGACGG TATGAACCTG GTGGCCAAGG AATACCTGGC CTGCCGCACG
GATTCGTCGG GCGCCTTGGT GCTCAGCGAA TTCACCGGTG CCGCAGCCGA ACTGCGTCAG
GCGTACCAGT GCAACCCGCA CGATCTGGAG GGTGTGAAGA ACGCCATCGA CGAGGCCGTG
CATCAGGATC CGGAGGACGG TAAGCGTCGC ATCCGGACCA TGCGCCGCCA GGTGCTGCAG
TACGACGTGG ACCGCTGGGC CCGTTCCTTC CTGCAGACCC TGTCCGGTCA AGTCGACGAG
GCCCCACCGA AGTGA
 
Protein sequence
MAAAEISPEG AEFIVVANRL PVDVERAPDG TLTWKEAPGG LVTALKPILS ARNGAWVGWP 
GSPDVGGEPI EGEDMLLVPV KLSAQEVEEH YEGFSNGSLW PLYHDVIVKP EYHREWWNTY
VEVNRRFAEE TAKVAAKGAT VWVQDYQLQL VPKMLRMLRP DVKIGFFLHI PFPPVELFMQ
MPWRREIIEG ILGADLVGFH LPGGAQNFLY LANRLAGYPT SKNTIGVRSK FGVVTVGFRS
VRVGAFPISI DSAELAATSK LPETRKRSRG LRKELGNPEK IMLGVDRLDY TKGIDVRLRA
IGELYREGRL DPERHVFVQL ATPSRERVES YKAMRNDIER QVGRINGDFG RVGHPVVHYI
HKPVPRNELV AFFGAADVML VTPLRDGMNL VAKEYLACRT DSSGALVLSE FTGAAAELRQ
AYQCNPHDLE GVKNAIDEAV HQDPEDGKRR IRTMRRQVLQ YDVDRWARSF LQTLSGQVDE
APPK