Gene Tpau_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3578 
Symbol 
ID9157757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3686851 
End bp3687561 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648495 
Protein GI296141252 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.490855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCAC TCCGACGGTC GGCGGTCGTC GTCGCCGCTC TGGCCATCGC AGCACCCGCC 
GGGGTCGCCC AGGCCGCTCC TGCGCCGGCG CCCGGTAAGC CGGCCACCCC GGCCGCCCAG 
TTGCTGCTGA CCCAGGCCGA GTTCCCCGCC GGCTACGAGG TGCAGCAGGT CTCGGCCAAG 
GATCTCGCCG ACGTACTGCG CGATGTGGGT AGCGGCCTGA ACAAGGCCAA GGTCACGCCC 
GCGCACTGCG CACCGGTGGT CAACCGCGCC GACTTCGAGC GGTCGAGCAA GCTCCCTCTG 
GTGGTCGGTG TCAACAAGGC GAAGAAGGCC GCGATCTCCG AGGTTCTCGC CGAGGGTCAG 
AGCATCGACA AGGCGCTCGC GAACCCGGCC GGCTGCGACA AGGTGCGCGT GGAGATGAAC 
GACATCGCCG GCACCAAGGA CCGCGTCGTC CTGGACATCA CCTCGACACC GGTGAACCTC 
CCGGGCGCAC CCGCCGGCAG CAAGGCCGTG CTCGCCACGT CGACCGGCAC CGTCACCGTC 
GATGGCAAGG CTAAGCCGAT CAAGCAGGAG CAGTTGCTCG CGGGCGCGAA CGTCCGTGGT 
TACGCGCTGC TCATCACCGG TTCGGGCGCC GGACCGAACC CCGTCGCCGA CCGCGACGGT 
GTCGCCAAGG CTCTGGCCAC CGGCATCAAT AAGGTGCGCA CCGCGCGCTA G
 
Protein sequence
MHALRRSAVV VAALAIAAPA GVAQAAPAPA PGKPATPAAQ LLLTQAEFPA GYEVQQVSAK 
DLADVLRDVG SGLNKAKVTP AHCAPVVNRA DFERSSKLPL VVGVNKAKKA AISEVLAEGQ 
SIDKALANPA GCDKVRVEMN DIAGTKDRVV LDITSTPVNL PGAPAGSKAV LATSTGTVTV 
DGKAKPIKQE QLLAGANVRG YALLITGSGA GPNPVADRDG VAKALATGIN KVRTAR