| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3570 |
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| Symbol | |
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| ID | 9157749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3679213 |
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| End bp | 3680595 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003648487 |
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| Protein GI | 296141244 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.406953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACGC AGGTCACCGA CCGCTCGGGC GGTAACGAAC TGGGGACGAG CCTTAAACCC
CGGCACATCA CGATGATCTC GATCGCGGGC GTGATCGTCG CGGGTCTGTT CGTGGGCTCG
GCGAACGCGA TCAAGCTGGC GGGCCCGGCG GTGCTGATCT CGTACACGCT CGCCGGCCTG
TTGGTGATCC TGGTGATGCG GATGCTGGGC GAGATGGCGA CGGCGCAGCC GGACACGGGC
TCGTTCTCCA CCTATGCGGA GCGAGCCCTC GGGCGCTGGG CGGGGTGCAG CATCGGCTGG
TTGTACTGGC TGTTCTGGGT GCTGGTGATC CCGGTGGAGG CGACCGCCGC GGCGGTGATC
ATGGCCAAGG TGGTGGGCGG CCCGCAATGG TCCTGGGCGC TGCTCGTGGT GGTGCTGCTC
ACCGTGACGA ACCTGCTGTC GGTGGGCAAC TACGGCGAGT TCGAGTTCTG GTTCGCTCTG
ATCAAGGTGC TCGCGATCGT CGCTTTCCTG GTGCTCGGCG TGCTCGCGAT CCTCGGCCTG
CTGCCCGGTT CCGGTGTGTC CGGCGTGCAT CACCTGTGGG ATACCGGCGG CTTCATGCCG
AACGGGGCGA GTGCGGTGAT CGCGGCGATG CTCACCACCA TGTTCACGTT CATGGGCTCG
GAGATCGTGA CCATCGCCGC CGCCGAGTCG CCGGAACCGG CGAAGGGGAT CACCCGTGCG
GTGAATTCCG TGGTGTGGCG GATCTGCCTG TTCTATCTGG GCTCGATCTT CGTGGTCGTG
GCGCTGGTGC CGTGGAACTC GCTGGACTCG GCCACCGGCT CGTACCAGGC GGTGCTCACG
GCGATGAACA TCCCGGCGGC CGCGGGGATC ATGGATGTGG TGGTGCTGGT CGCGGTCGCG
TCGTGCCTCA ATAGCGCGCT CTACACCGCG TCGCGGATGC TGTACTCGCT GGCACAGCGC
GGCGACGCTC CCCGCGCCGC CGGCCGGACT ACCTCTCGCG GGGTTCCAGC GGTGTCGGTG
CTGGCGTCGA TGCTGCTCGG ATTCCTCGCC GTGATCGGCA ACTACGTGCT GCCGGAAAAG
CTGTTCGGTT ACCTGCTCGC GACCACCGGC GCGGTGGCGT TGTTCGTCTA CCTGGTGATC
GCGCTCAGCC AGATCGCCCT GCGCCGCCGG GCGACGGAAC CTTCGCCGCT GCGGATGTGG
TTCTTCCCGT GGGCCACCTA CGCAGTCATC GCCTTCATCG TGTTCATCAT CGTCGCGATG
ATCATCGACC CGAGCCAGCG CAGCGCGGTG GGCCTCTCGA CCGGCCTCGC GGTGTTCGTC
GTCGCGGCGA GCCTGCTGCA CCAGCGCCGC ATGGAGCGAC GGTCCGCCTC GGCCTCGTCG
TAA
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| Protein sequence | MNTQVTDRSG GNELGTSLKP RHITMISIAG VIVAGLFVGS ANAIKLAGPA VLISYTLAGL
LVILVMRMLG EMATAQPDTG SFSTYAERAL GRWAGCSIGW LYWLFWVLVI PVEATAAAVI
MAKVVGGPQW SWALLVVVLL TVTNLLSVGN YGEFEFWFAL IKVLAIVAFL VLGVLAILGL
LPGSGVSGVH HLWDTGGFMP NGASAVIAAM LTTMFTFMGS EIVTIAAAES PEPAKGITRA
VNSVVWRICL FYLGSIFVVV ALVPWNSLDS ATGSYQAVLT AMNIPAAAGI MDVVVLVAVA
SCLNSALYTA SRMLYSLAQR GDAPRAAGRT TSRGVPAVSV LASMLLGFLA VIGNYVLPEK
LFGYLLATTG AVALFVYLVI ALSQIALRRR ATEPSPLRMW FFPWATYAVI AFIVFIIVAM
IIDPSQRSAV GLSTGLAVFV VAASLLHQRR MERRSASASS
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