| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3563 |
|---|
| Symbol | |
|---|
| ID | 9157742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3670603 |
|---|
| End bp | 3671754 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | secretory lipase |
|---|
| Protein accession | YP_003648481 |
|---|
| Protein GI | 296141238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.668389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCGA CCGCGCTCGT CATGGGCCTG TCCATCAGTG CGTGCACGAC GCCCGGCGGG
CCGCCGAGCC CGTCGGCGTC GAGTGCCGCG CCGGCTCCGG GTGCCCTGCT CACCCAGCGG
CCGCTCACCG GAGTCGATCC CGCGACCGTG TCGGCGGGCT CGATGACCTA CCTGCGATAC
CGCTCGACGG CACCGTCCGG GGGTCCCGTG GAGGTCTCCG GTGCGCTCTT CCTCCCGGCC
GGGGCCGCTC CGGCGGGCGG CTGGCCGGTG GTGGCCTTCG GCCACGGCAC CTCCGGCGTC
GCGAATTCCT GCGCCCCGAC CTCGTCCCCC ACGCTCTTCG GTTCGGCGCC GGTCGTGGCC
CAGTTGGTGC GCCAGGGCGC CGCGGTGGTG ATGACCAACT ATCAGGGATT GGACGGACCT
GGAGCGGCTC CCTACGGCGA TGCCGTCTCA TCGGGCTACG ACGTGCTCGA TTCGGTGCGC
GCAGCCCGCG CGACGGGGCT TCCCCTGGCG GATCGGACCA TTCTCGTCGG AGTCTCCCAG
GGCGGCCGGG CCGCGGAATC CGCCGCGGAA TCGGCGGCGC AATACGCGCC GGAGCTCGAT
CTGCGGGGGT CGGTGCTGCT CTCCCCCGGA CTGATCACCC GGTTCGCGGA CGCCGTCTCG
GCCGGAACCC TGAACGCCCC GGAGCAGTAT CTGGTTCTCC CGTATCTGGT GTCGGCGGCG
CGCTACGGCG ATCCGGGATT CGGATTCGAC CAGCTCCTCG GCGGCGATCT GCTGGCCGCC
GCGCCCCGCC TCGCGGCACA GTGCACCGGG CAGGCGGATC CGGCCGACGC GGCGACCGCC
CGCGCCGGTG ATGCGCGATT CGCCTCGGCA CAGGCGGAGC GGACGTTCCG GAACATGGAA
GAACGCACCG ATGTGCCGCG GCGCGGACAC CGCGTGCCCA CATACGTGGT CCGCGGCGAC
GCCGACCGCC TGGTATCGAC GCCCTGGACG GCCGAGGGGG TCGCGCGGAT GTGCGCGCTG
GGAACGCCGG TCCGGGACGT GGTGGTGCCC GGCGGGCACG AGGCACCGGC CGCCGTGACC
GATCTCTGGC TGGGCTGGAT CGCCGGATTG CTCCGGGGAT CTACGGATTT CACGCCGTCG
TGCCCTGGAT AA
|
|---|
| Protein sequence | MAATALVMGL SISACTTPGG PPSPSASSAA PAPGALLTQR PLTGVDPATV SAGSMTYLRY
RSTAPSGGPV EVSGALFLPA GAAPAGGWPV VAFGHGTSGV ANSCAPTSSP TLFGSAPVVA
QLVRQGAAVV MTNYQGLDGP GAAPYGDAVS SGYDVLDSVR AARATGLPLA DRTILVGVSQ
GGRAAESAAE SAAQYAPELD LRGSVLLSPG LITRFADAVS AGTLNAPEQY LVLPYLVSAA
RYGDPGFGFD QLLGGDLLAA APRLAAQCTG QADPADAATA RAGDARFASA QAERTFRNME
ERTDVPRRGH RVPTYVVRGD ADRLVSTPWT AEGVARMCAL GTPVRDVVVP GGHEAPAAVT
DLWLGWIAGL LRGSTDFTPS CPG
|
|---|
| |